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Search term: YPL126W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NAN1
SGD link S000006047
Alternative ID YPL126W
Description U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA
Synonyms YPL126W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1963 ACDHYP-

KOGs classification KOGs description
R
POORLY CHARACTERIZED
General function prediction only
WD40 repeat protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g18900 GI:15224252
Arabidopsis thaliana (Ath) At3g26480 GI:15231565 Q9LIM7
Caenorhabditis elegans (Cel) CE17083_2 GI:17507485 O44728
Drosophila melanogaster (Dme) 7298747 GI:7298747 Q9VIG1
Homo sapiens (Hsa) Hs17439994 GI:17439994
Saccharomyces cerevisiae (Sce) YPL126w
(S000006047)
GI:6325131 Q02931
Schizosaccharomyces pombe (Spo) SPAC1B3.13 GI:19115710 O13878


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPAC1B3.13
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0030869 RENT complex C
IPI
SceS000006047
GO:0030515 snoRNA binding F
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0007046 ribosome biogenesis P
RCA
SceS000006047
GO:0030490 processing of 20S pre-rRNA P
IMP
SceS000006047
IPI
SceS000006047
ISS
SpoSPAC1B3.13

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000006047

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000006047
(YPL126W)
Dictyostelium discoideum (Ddi) 1903 1 DDB0190111
Schizosaccharomyces pombe (Spo) 2306 1 SPAC1B3.13 O13878


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPAC1B3.13
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0030869 RENT complex C
IPI
SceS000006047
GO:0030515 snoRNA binding F
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0007046 ribosome biogenesis P
RCA
SceS000006047
GO:0030490 processing of 20S pre-rRNA P
IMP
SceS000006047
IPI
SceS000006047
ISS
SpoSPAC1B3.13

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40441

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NAN1
(S000006047)
GI:6325131 Q02931
Kluyveromyces lactis (Kla) KLLA0D06677g GI:50306765 Q6CRT1
Eremothecium gossypii (Ego) ACR162C GI:45185848


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000006047
GO:0030869 RENT complex C
IPI
SceS000006047
GO:0030515 snoRNA binding F
IPI
SceS000006047
GO:0007046 ribosome biogenesis P
RCA
SceS000006047
GO:0030490 processing of 20S pre-rRNA P
IMP
SceS000006047
IPI
SceS000006047

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20799

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago1209 ACR162C
Candida glabrata (Cgl) cgl4779 CAGL0M02805g
Debaryomyces hansenii (Dha) dha6605 DEHA0G20251g
Kluyveromyces lactis (Kla) kla2357 KLLA0D06677g
Saccharomyces cerevisiae (Sce) sce6284 YPL126W
(S000006047)
Yarrowia lipolytica (Yli) yli939 YALI0B04862g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000006047
GO:0030869 RENT complex C
IPI
SceS000006047
GO:0030515 snoRNA binding F
IPI
SceS000006047
GO:0007046 ribosome biogenesis P
RCA
SceS000006047
GO:0030490 processing of 20S pre-rRNA P
IMP
SceS000006047
IPI
SceS000006047

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC1B3.13
(O13878)
YPL126W
(S000006047)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPAC1B3.13
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0030869 RENT complex C
IPI
SceS000006047
GO:0030515 snoRNA binding F
IPI
SceS000006047
ISS
SpoSPAC1B3.13
GO:0007046 ribosome biogenesis P
RCA
SceS000006047
GO:0030490 processing of 20S pre-rRNA P
IMP
SceS000006047
IPI
SceS000006047
ISS
SpoSPAC1B3.13

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