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Search term: YOL010W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RCL1
SGD link S000005370
Alternative ID YOL010W
Description RNA terminal phosphate cyclase-like protein involved in rRNA processing at sites A0, A1, and A2; does not possess detectable RNA cyclase activity
Synonyms YOL010W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3980 -CDHYPE

KOGs classification KOGs description
A
INFORMATION STORAGE AND PROCESSING
RNA processing and modification
RNA 3'-terminal phosphate cyclase

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE05125 GI:17538043
Drosophila melanogaster (Dme) 7290258
(FBgn0025630)
GI:18543269 O77264
Drosophila melanogaster (Dme) 7292922 GI:12644328
Homo sapiens (Hsa) Hs4506589
(RTCD1)
GI:4506589 O00442
Homo sapiens (Hsa) Hs21361285 GI:10434565 Q9Y2P8
Homo sapiens (Hsa) HsM5032043 GI:5032043
Saccharomyces cerevisiae (Sce) YOL010w
(S000005370)
GI:6324564 Q08096
Schizosaccharomyces pombe (Spo) SPAC12G12.06c GI:19113804 Q09870
Encephalitozoon cuniculi (Ecu) ECU06g1030 GI:19074353 Q8SRP7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISS
DmeFBgn0025630
GO:0005654 nucleoplasm C
TAS
HsaO00442
GO:0005730 nucleolus C
IDA
SceS000005370
ISS
SpoSPAC12G12.06c
NAS
HsaQ9Y2P8
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC12G12.06c
GO:0003674 molecular_function F
ND
SceS000005370
GO:0003723 RNA binding F
TAS
HsaO00442
GO:0003963 RNA-3'-phosphate cyclase activity F
ISS
DmeFBgn0025630
NAS
HsaQ9Y2P8
TAS
HsaO00442
GO:0000244 assembly of spliceosomal tri-snRNP P
NR
HsaO00442
GO:0006364 rRNA processing P
ISS
SpoSPAC12G12.06c
GO:0006365 35S primary transcript processing P
IMP
SceS000005370
GO:0007046 ribosome biogenesis P
RCA
SceS000005370
GO:0008150 biological_process P
ND
HsaQ9Y2P8

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000005370

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000005370
(YOL010W)
Anopheles gambiae (Aga) 899 1 ENSANGP00000020525
Canis familiaris (Cfa) 780 1 ENSCAFP00000003072
Danio rerio (Dre) 1479 1 ENSDARP00000023892
(rtcd1)
Q7ZUX5
Takifugu rubripes (Fru) 830 1 SINFRUP00000168521
Gallus gallus (Gga) 673 1 ENSGALP00000024184
(RCL1)
Homo sapiens (Hsa) 791 1 ENSP00000239262
(RCL1)
Q9Y2P8
Mus musculus (EMM) 800 1 ENSMUSP00000067579
(MGI:1913275)
Q9JJT0
Pan troglodytes (Ptr) 728 1 ENSPTRP00000035488
Rattus norvegicus (ERN) 750 1 ENSRNOP00000020809
(RGD:1305320)
Q5BJN0
Caenorhabditis elegans (Cel) 816 1 WBGene00022852
(CE32083)
Q23400
Dictyostelium discoideum (Ddi) 672 1 DDB0218402
Drosophila melanogaster (Dme) 893 1 CG11130-PA
(FBgn0020909)
Mus musculus (Mmu) 778 1 MGI:1913275 Q3THS8
Oryza sativa (Osa) 778 1 Q75LH9 Q75LH9
Rattus norvegicus (Rno) 664 1 RGD:1305320
Schizosaccharomyces pombe (Spo) 1187 1 SPAC12G12.06c Q09870
Arabidopsis thaliana (Ath) 885 1 NP_680196
(At5g22100.1)
Q9C578
Plasmodium falciparum (Pfa) 951 1 PF14_0677


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPF14_0677
GO:0005634 nucleus C
NAS
DmeFBgn0020909
GO:0005730 nucleolus C
IDA
MmuMGI:1913275
SceS000005370
ISS
RnoRGD:1305320
SpoSPAC12G12.06c
NAS
HsaQ9Y2P8
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC12G12.06c
GO:0045335 phagocytic vesicle C
IDA
DdiDDB0218402
GO:0003674 molecular_function F
ND
SceS000005370
GO:0003963 RNA-3'-phosphate cyclase activity F
ISS
DmeFBgn0020909
RnoRGD:1305320
NAS
HsaQ9Y2P8
RCA
AthAt5g22100
GO:0000003 reproduction P
IMP
CelWBGene00022852
GO:0000910 cytokinesis P
IMP
CelWBGene00022852
GO:0006364 rRNA processing P
ISS
SpoSPAC12G12.06c
GO:0006365 35S primary transcript processing P
IMP
SceS000005370
ISS
MmuMGI:1913275
GO:0007046 ribosome biogenesis P
ISS
PfaPF14_0677
RCA
SceS000005370
GO:0007276 gametogenesis P
IMP
CelWBGene00022852
GO:0007582 physiological process P
IMP
CelWBGene00022852
GO:0008150 biological_process P
ND
AthAt5g22100
HsaQ9Y2P8
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00022852
GO:0018991 oviposition P
IMP
CelWBGene00022852
GO:0040007 growth P
IMP
CelWBGene00022852
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022852
GO:0040011 locomotion P
IMP
CelWBGene00022852
GO:0040018 positive regulation of body size P
IMP
CelWBGene00022852
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00022852

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4217

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RCL1 GI:21361285 Q9Y2P8
Pan troglodytes (Ptr) RCL1 GI:114623668
Canis familiaris (Cfa) LOC484183 GI:73946912
Mus musculus (Mmu) Rcl1
(MGI:1913275)
GI:10946950 Q3THS8
Rattus norvegicus (Rno) Rcl1
(RGD:1305320)
GI:61557112 Q7TQ76
Gallus gallus (Gga) RCL1 GI:50761706
Drosophila melanogaster (Dme) Rtc1
(FBgn0020909)
GI:18860065 P56175
Anopheles gambiae (Aga) ENSANGG00000018036 GI:58386084 Q7Q8X5
Caenorhabditis elegans (Cel) ZK1127.5
(CE32083;
WBGene00022852)
GI:32564710 Q23400
Schizosaccharomyces pombe (Spo) SPAC12G12.06c GI:19113804 Q09870
Saccharomyces cerevisiae (Sce) RCL1
(S000005370)
GI:6324564 Q08096
Kluyveromyces lactis (Kla) KLLA0C05984g GI:50305013 Q6CUC5
Eremothecium gossypii (Ego) ACL015W GI:45185673
Arabidopsis thaliana (Ath) AT5G22100 GI:22326964 Q9C578
Oryza sativa (Osa) OSJNBa0096I06.28 GI:50919913


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
NAS
DmeFBgn0020909
GO:0005730 nucleolus C
IDA
MmuMGI:1913275
SceS000005370
ISS
RnoRGD:1305320
SpoSPAC12G12.06c
NAS
HsaQ9Y2P8
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC12G12.06c
GO:0003674 molecular_function F
ND
SceS000005370
GO:0003963 RNA-3'-phosphate cyclase activity F
ISS
DmeFBgn0020909
RnoRGD:1305320
NAS
HsaQ9Y2P8
RCA
AthAt5g22100
GO:0000003 reproduction P
IMP
CelWBGene00022852
GO:0000910 cytokinesis P
IMP
CelWBGene00022852
GO:0006364 rRNA processing P
ISS
SpoSPAC12G12.06c
GO:0006365 35S primary transcript processing P
IMP
SceS000005370
ISS
MmuMGI:1913275
GO:0007046 ribosome biogenesis P
RCA
SceS000005370
GO:0007276 gametogenesis P
IMP
CelWBGene00022852
GO:0007582 physiological process P
IMP
CelWBGene00022852
GO:0008150 biological_process P
ND
AthAt5g22100
HsaQ9Y2P8
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00022852
GO:0018991 oviposition P
IMP
CelWBGene00022852
GO:0040007 growth P
IMP
CelWBGene00022852
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022852
GO:0040011 locomotion P
IMP
CelWBGene00022852
GO:0040018 positive regulation of body size P
IMP
CelWBGene00022852
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00022852

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2239

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga7463 ENSANGP00000020525
Ashbya gossypii (Ago) ago1034 ACL015W
Arabidopsis thaliana (Ath) ath24438 At5g22100.1
Caenorhabditis elegans (Cel) cel21570 ZK1127.5
(CE32083;
WBGene00022852)
Q23400
Candida glabrata (Cgl) cgl1044 CAGL0E02343g
Cryptococcus neoformans (Cne) cne4413 177.m03166
Dictyostelium discoideum (Ddi) ddi4738 DDB0218402
Debaryomyces hansenii (Dha) dha5496 DEHA0F24860g
Drosophila melanogaster (Dme) dme17749 CG11130-PA
(FBgn0020909)
Encephalitozoon cuniculi (Ecu) ecu1580 19074353
Takifugu rubripes (Fru) fru9076 SINFRUP00000138294
Takifugu rubripes (Fru) fru9075 SINFRUP00000168521
Gallus gallus (Gga) gga27722 ENSGALP00000024184
(RCL1)
Homo sapiens (Hsa) hsa30984 ENSP00000239262
(RCL1)
Q9Y2P8
Kluyveromyces lactis (Kla) kla1463 KLLA0C05984g
Mus musculus (Mmu) mmu13570 ENSMUSP00000067579
(MGI:1913275)
Q9JJT0
Neurospora crassa (Ncr) ncr2591 NCU02675.2
Oryza sativa (Osa) osa41809 5267.m00181
Oryza sativa (Osa) osa84827 8365.m00170
Plasmodium falciparum (Pfa) pfa1504 PF14_0677
Rattus norvegicus (Rno) rno3949 ENSRNOP00000020809
(RGD:1305320)
Q5BJN0
Saccharomyces cerevisiae (Sce) sce5557 YOL010W
(S000005370)
Schizosaccharomyces pombe (Spo) spo1539 SPAC12G12.06c Q09870
Yarrowia lipolytica (Yli) yli191 YALI0A05555g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPF14_0677
GO:0005634 nucleus C
NAS
DmeFBgn0020909
GO:0005730 nucleolus C
IDA
MmuMGI:1913275
SceS000005370
ISS
RnoRGD:1305320
SpoSPAC12G12.06c
NAS
HsaQ9Y2P8
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC12G12.06c
GO:0045335 phagocytic vesicle C
IDA
DdiDDB0218402
GO:0003674 molecular_function F
ND
SceS000005370
GO:0003963 RNA-3'-phosphate cyclase activity F
ISS
DmeFBgn0020909
RnoRGD:1305320
NAS
HsaQ9Y2P8
RCA
AthAt5g22100
GO:0000003 reproduction P
IMP
CelWBGene00022852
GO:0000910 cytokinesis P
IMP
CelWBGene00022852
GO:0006364 rRNA processing P
ISS
SpoSPAC12G12.06c
GO:0006365 35S primary transcript processing P
IMP
SceS000005370
ISS
MmuMGI:1913275
GO:0007046 ribosome biogenesis P
ISS
PfaPF14_0677
RCA
SceS000005370
GO:0007276 gametogenesis P
IMP
CelWBGene00022852
GO:0007582 physiological process P
IMP
CelWBGene00022852
GO:0008150 biological_process P
ND
AthAt5g22100
HsaQ9Y2P8
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00022852
GO:0018991 oviposition P
IMP
CelWBGene00022852
GO:0040007 growth P
IMP
CelWBGene00022852
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022852
GO:0040011 locomotion P
IMP
CelWBGene00022852
GO:0040018 positive regulation of body size P
IMP
CelWBGene00022852
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00022852

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC12G12.06c
(Q09870)
YOL010W
(S000005370)