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Search term: YNL231C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PDR16
SGD link S000005175
Alternative ID YNL231C
Description Phosphatidylinositol transfer protein (PITP) controlled by the multiple drug resistance regulator Pdr1p, localizes to lipid particles and microsomes, controls levels of various lipids, may regulate lipid synthesis, homologous to Pdr17p
Synonyms YNL231C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1470 A---YP-

KOGs classification KOGs description
I
METABOLISM
Lipid transport and metabolism
Phosphatidylinositol transfer protein PDR16 and related proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g01630 GI:15223439 Q9LQ96
Arabidopsis thaliana (Ath) At1g05370 GI:15220495
Arabidopsis thaliana (Ath) At1g14820 GI:15223912
Arabidopsis thaliana (Ath) At1g22180 GI:15219230
Arabidopsis thaliana (Ath) At1g75170 GI:15222153 Q9FRK8
Arabidopsis thaliana (Ath) At3g22410 GI:15228742 Q9LUV9
Arabidopsis thaliana (Ath) At4g08690 GI:15236573 O22270
Arabidopsis thaliana (Ath) At4g36640 GI:15234469 O23217
Arabidopsis thaliana (Ath) At5g04780_2 GI:15238326
Arabidopsis thaliana (Ath) At5g63060 GI:15242621
Saccharomyces cerevisiae (Sce) YLR380w
(S000004372)
GI:6323412 Q06705
Saccharomyces cerevisiae (Sce) YNL231c
(S000005175)
GI:6324098 P53860
Saccharomyces cerevisiae (Sce) YNL264c
(S000005208)
GI:6324065 P53844
Schizosaccharomyces pombe (Spo) SPAC3H8.02 GI:19113907 Q10138
Schizosaccharomyces pombe (Spo) SPAC589.09 GI:19114969 Q9HDZ5
Schizosaccharomyces pombe (Spo) SPBC365.01 GI:19112822 Q9UUC2
Schizosaccharomyces pombe (Spo) SPCC23B6.04c_2 GI:19075627 Q9UU99


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000935 barrier septum C
IDA
SpoSPBC365.01
GO:0005575 cellular_component C
ND
AthAt1g22180
At4g08690
At1g01630
At1g14820
GO:0005634 nucleus C
IDA
SpoSPBC365.01
GO:0005737 cytoplasm C
IDA
SceS000004372
S000005208
S000005175
ISS
SpoSPAC589.09
SPAC3H8.02
SPBC365.01
GO:0005739 mitochondrion C
IDA
SceS000004372
SpoSPAC589.09
GO:0005792 microsome C
IDA
SceS000005175
S000004372
GO:0005811 lipid particle C
IDA
SceS000005175
GO:0005829 cytosol C
IDA
SceS000004372
SpoSPBC365.01
GO:0051286 cell tip C
IDA
SpoSPBC365.01
GO:0003674 molecular_function F
ND
AthAt1g22180
GO:0005215 transporter activity F
RCA
AthAt4g36640
At4g08690
At1g14820
At1g75170
At1g01630
GO:0008525 phosphatidylcholine transporter
activity
F
ISS
SpoSPAC589.09
SPAC3H8.02
SPBC365.01
GO:0008526 phosphatidylinositol transporter
activity
F
IDA
SceS000005175
S000004372
S000005208
ISS
SpoSPAC3H8.02
SPAC589.09
SPCC23B6.04c
SPBC365.01
GO:0006810 transport P
RCA
AthAt1g01630
At1g14820
At4g08690
At1g75170
At4g36640
GO:0007047 cell wall organization and biogenesis P
IGI
SceS000004372
ISS
SpoSPAC589.09
SPAC3H8.02
SPBC365.01
GO:0008150 biological_process P
ND
AthAt1g22180
GO:0008654 phospholipid biosynthesis P
IMP
SceS000005208
GO:0015914 phospholipid transport P
IDA
SceS000004372
S000005175
S000005208
ISS
SpoSPAC3H8.02
SPAC589.09
SPBC365.01
SPCC23B6.04c
GO:0016126 sterol biosynthesis P
IMP
SceS000005175
GO:0030433 ER-associated protein catabolism P
IMP
SceS000004372
GO:0042493 response to drug P
IGI
SceS000005208
S000005175

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000005175

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000005175
(YNL231C)
Dictyostelium discoideum (Ddi) 1296 1 DDB0192040
Saccharomyces cerevisiae (Sce) 1296 0.337 S000005208
(YNL264C)
Oryza sativa (Osa) 1191 1 Q75GU9 Q75GU9
Saccharomyces cerevisiae (Sce) 1191 1 S000005208
(YNL264C)
Oryza sativa (Osa) 1191 0.304 Q6Z8I8 Q6Z8I8
Oryza sativa (Osa) 1191 0.298 Q9LDJ7 Q9LDJ7
Schizosaccharomyces pombe (Spo) 1059 1 SPCC23B6.04c Q9UU99
Saccharomyces cerevisiae (Sce) 1059 0.075 S000005208
(YNL264C)
Arabidopsis thaliana (Ath) 1455 1 NP_192609
(At4g08690.1)
O22270
Arabidopsis thaliana (Ath) 1455 0.506 NP_173637
(At1g22180.2)
Q9LM14
Arabidopsis thaliana (Ath) 1455 0.373 NP_850948
(At1g22180.1)
Arabidopsis thaliana (Ath) 1455 0.373 NP_973882
(At1g22180.3)
Saccharomyces cerevisiae (Sce) 1455 0.356 S000005208
(YNL264C)
Arabidopsis thaliana (Ath) 1455 0.285 NP_177653
(At1g75170.1)
Q9FRK8
Arabidopsis thaliana (Ath) 1455 0.269 NP_195382
(At4g36640.1)
O23217
Arabidopsis thaliana (Ath) 1455 0.129 NP_196098
(At5g04780.1)


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g22180
At4g08690
GO:0005737 cytoplasm C
IDA
SceS000005208
S000005175
GO:0005792 microsome C
IDA
SceS000005175
GO:0005811 lipid particle C
IDA
SceS000005175
GO:0003674 molecular_function F
ND
AthAt1g22180
GO:0005215 transporter activity F
RCA
AthAt4g36640
At4g08690
At1g75170
GO:0008526 phosphatidylinositol transporter
activity
F
IDA
SceS000005175
S000005208
ISS
SpoSPCC23B6.04c
GO:0006810 transport P
RCA
AthAt4g08690
At1g75170
At4g36640
GO:0008150 biological_process P
ND
AthAt1g22180
GO:0008654 phospholipid biosynthesis P
IMP
SceS000005208
GO:0015914 phospholipid transport P
IDA
SceS000005175
S000005208
ISS
SpoSPCC23B6.04c
GO:0016126 sterol biosynthesis P
IMP
SceS000005175
GO:0042493 response to drug P
IGI
SceS000005208
S000005175

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31862

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC23B6.04c GI:19075627 Q9UU99
Saccharomyces cerevisiae (Sce) PDR16
(S000005175)
GI:6324098 P53860
Kluyveromyces lactis (Kla) KLLA0D19679g GI:50307885 Q6CQ53
Eremothecium gossypii (Ego) ABL198C GI:45185032
Magnaporthe grisea (Mgr) MG00707.4 GI:39974293
Neurospora crassa (Ncr) GeneID:2704974 GI:32404570
Arabidopsis thaliana (Ath) AT4G36640 GI:15234469 O23217


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000005175
GO:0005792 microsome C
IDA
SceS000005175
GO:0005811 lipid particle C
IDA
SceS000005175
GO:0005215 transporter activity F
RCA
AthAt4g36640
GO:0008526 phosphatidylinositol transporter
activity
F
IDA
SceS000005175
ISS
SpoSPCC23B6.04c
GO:0006810 transport P
RCA
AthAt4g36640
GO:0015914 phospholipid transport P
IDA
SceS000005175
ISS
SpoSPCC23B6.04c
GO:0016126 sterol biosynthesis P
IMP
SceS000005175
GO:0042493 response to drug P
IGI
SceS000005175

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3928

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago394 ABL198C
Ashbya gossypii (Ago) ago3853 AFR660W
Arabidopsis thaliana (Ath) ath6832 At1g75170.1
Arabidopsis thaliana (Ath) ath21835 At4g36640.1
Candida glabrata (Cgl) cgl3315 CAGL0J07436g
Candida glabrata (Cgl) cgl3344 CAGL0J08074g
Dictyostelium discoideum (Ddi) ddi10134 DDB0192040
Debaryomyces hansenii (Dha) dha438 DEHA0A09845g
Debaryomyces hansenii (Dha) dha5893 DEHA0G04433g
Kluyveromyces lactis (Kla) kla1308 KLLA0C02519g
Kluyveromyces lactis (Kla) kla2935 KLLA0D19679g
Neurospora crassa (Ncr) ncr3487 NCU03596.2
Oryza sativa (Osa) osa59549 6354.m00100
Oryza sativa (Osa) osa66946 6847.m00114
Oryza sativa (Osa) osa87949 9534.m00225
Saccharomyces cerevisiae (Sce) sce5352 YNL231C
(S000005175)
Saccharomyces cerevisiae (Sce) sce5385 YNL264C
(S000005208)
Schizosaccharomyces pombe (Spo) spo2635 SPCC23B6.04c Q9UU99
Yarrowia lipolytica (Yli) yli281 YALI0A08448g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000005208
S000005175
GO:0005792 microsome C
IDA
SceS000005175
GO:0005811 lipid particle C
IDA
SceS000005175
GO:0005215 transporter activity F
RCA
AthAt4g36640
At1g75170
GO:0008526 phosphatidylinositol transporter
activity
F
IDA
SceS000005175
S000005208
ISS
SpoSPCC23B6.04c
GO:0006810 transport P
RCA
AthAt1g75170
At4g36640
GO:0008654 phospholipid biosynthesis P
IMP
SceS000005208
GO:0015914 phospholipid transport P
IDA
SceS000005175
S000005208
ISS
SpoSPCC23B6.04c
GO:0016126 sterol biosynthesis P
IMP
SceS000005175
GO:0042493 response to drug P
IGI
SceS000005208
S000005175

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC23B6.04c
(Q9UU99)
YNL231C
(S000005175)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000005175
GO:0005792 microsome C
IDA
SceS000005175
GO:0005811 lipid particle C
IDA
SceS000005175
GO:0008526 phosphatidylinositol transporter
activity
F
IDA
SceS000005175
ISS
SpoSPCC23B6.04c
GO:0015914 phospholipid transport P
IDA
SceS000005175
ISS
SpoSPCC23B6.04c
GO:0016126 sterol biosynthesis P
IMP
SceS000005175
GO:0042493 response to drug P
IGI
SceS000005175

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Search for gene by ID or name:

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk