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Search term: YNL002C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RLP7
SGD link S000004947
Alternative ID YNL002C
Description Nucleolar protein with similarity to large ribosomal subunit L7 proteins; constituent of 66S pre-ribosomal particles; plays an essential role in processing of precursors to the large ribosomal subunit RNAs
Synonyms YNL002C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3184 ACDHYPE

KOGs classification KOGs description
J
INFORMATION STORAGE AND PROCESSING
Translation, ribosomal structure and biogenesis
60S ribosomal protein L7

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g80750 GI:15220825 Q9SAI5
Arabidopsis thaliana (Ath) At2g01250 GI:15226212 P60040
Arabidopsis thaliana (Ath) At2g44120 GI:15224824
Arabidopsis thaliana (Ath) At3g13580 GI:15231288 Q9LHP1
Caenorhabditis elegans (Cel) CE11024
(WBGene00004418)
GI:17507559 O01802
Drosophila melanogaster (Dme) 7297615 GI:13124809 P32100
Drosophila melanogaster (Dme) 7297909 GI:7297909
Homo sapiens (Hsa) Hs13649740 GI:13649740
Homo sapiens (Hsa) Hs15431301
(RPL7)
GI:15431301 P18124
Homo sapiens (Hsa) Hs17435391 GI:17435391
Homo sapiens (Hsa) Hs17436553 GI:17436553
Homo sapiens (Hsa) Hs17438700 GI:17438700
Homo sapiens (Hsa) Hs17439312 GI:17439312
Homo sapiens (Hsa) Hs17447155 GI:17447155
Homo sapiens (Hsa) Hs17452755 GI:17452755
Homo sapiens (Hsa) Hs17454008 GI:17454008
Homo sapiens (Hsa) Hs17456022 GI:17456022
Homo sapiens (Hsa) Hs17456110 GI:17456110
Homo sapiens (Hsa) Hs17475562 GI:17475562
Homo sapiens (Hsa) Hs17475750 GI:17475750
Homo sapiens (Hsa) Hs17482504 GI:17482504
Homo sapiens (Hsa) Hs17486085 GI:17486085
Homo sapiens (Hsa) Hs18544441 GI:18544441
Homo sapiens (Hsa) Hs18552827 GI:18552827
Homo sapiens (Hsa) Hs18581169 GI:18581169
Homo sapiens (Hsa) Hs18586190 GI:18586190
Homo sapiens (Hsa) Hs18594828 GI:18594828
Homo sapiens (Hsa) Hs18595820 GI:18595820
Homo sapiens (Hsa) Hs18599429 GI:18599429
Homo sapiens (Hsa) Hs18602998 GI:18602998
Homo sapiens (Hsa) Hs18604030 GI:18604030
Homo sapiens (Hsa) Hs20471558 GI:20471558
Homo sapiens (Hsa) Hs20476354 GI:20476354
Homo sapiens (Hsa) Hs20533158 GI:20533158
Homo sapiens (Hsa) Hs20536926 GI:20536926
Homo sapiens (Hsa) Hs20537431 GI:20537431
Homo sapiens (Hsa) Hs20539610 GI:20539610
Homo sapiens (Hsa) Hs20542559 GI:20542559
Homo sapiens (Hsa) Hs20545549 GI:20545549
Homo sapiens (Hsa) Hs20550426 GI:20550426
Homo sapiens (Hsa) Hs20551897 GI:20551897
Homo sapiens (Hsa) Hs20555186 GI:20555186
Homo sapiens (Hsa) Hs20555640 GI:20555640
Homo sapiens (Hsa) Hs22042096 GI:22042096
Homo sapiens (Hsa) Hs22042125 GI:22042125
Homo sapiens (Hsa) Hs22042139_3 GI:22042139
Homo sapiens (Hsa) Hs22050300 GI:22050300
Homo sapiens (Hsa) Hs22055184 GI:22055184
Homo sapiens (Hsa) Hs22055841 GI:22055841
Homo sapiens (Hsa) Hs22057886 GI:22057886
Homo sapiens (Hsa) Hs22058429 GI:22058429
Homo sapiens (Hsa) Hs22059586 GI:22059586
Homo sapiens (Hsa) Hs22062310 GI:22062310
Homo sapiens (Hsa) Hs22063265 GI:22063265
Homo sapiens (Hsa) Hs22064026 GI:22064026
Homo sapiens (Hsa) Hs22064401 GI:22064401
Homo sapiens (Hsa) Hs22068585 GI:22068585
Homo sapiens (Hsa) Hs22069283 GI:22069283
Saccharomyces cerevisiae (Sce) YGL076c
(S000003044)
GI:6321362 P05737
Saccharomyces cerevisiae (Sce) YNL002c
(S000004947)
GI:6324326 P40693
Saccharomyces cerevisiae (Sce) YPL198w
(S000006119)
GI:6325058 Q12213
Schizosaccharomyces pombe (Spo) SPAC3H5.07 GI:19115097 P25457
Schizosaccharomyces pombe (Spo) SPAC664.06 GI:19114366 P17937
Schizosaccharomyces pombe (Spo) SPBC18H10.12c GI:19112528 O60143
Encephalitozoon cuniculi (Ecu) ECU03g0950 GI:19173053 Q8SS93


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC18H10.12c
GO:0005730 nucleolus C
IDA
SceS000004947
SpoSPAC3H5.07
SPAC664.06
SPBC18H10.12c
GO:0005737 cytoplasm C
IDA
SpoSPAC3H5.07
GO:0005830 cytosolic ribosome (sensu Eukaryota) C
IDA
AthAt3g13580
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
IDA
SceS000003044
ISS
SpoSPAC664.06
SPAC3H5.07
SPBC18H10.12c
TAS
HsaP18124
SceS000006119
GO:0015934 large ribosomal subunit C
RCA
AthAt2g44120
At3g13580
At2g01250
GO:0003723 RNA binding F
TAS
HsaP18124
GO:0003735 structural constituent of ribosome F
IDA
SceS000003044
ISS
SpoSPAC664.06
SPAC3H5.07
SPBC18H10.12c
RCA
AthAt2g44120
At3g13580
At2g01250
TAS
HsaP18124
SceS000006119
GO:0019843 rRNA binding F
ISS
SceS000004947
GO:0000003 reproduction P
IMP
CelWBGene00004418
GO:0006412 protein biosynthesis P
RCA
AthAt2g44120
At2g01250
At3g13580
TAS
HsaP18124
GO:0007046 ribosome biogenesis P
RCA
SceS000004947
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00004418
GO:0030489 processing of 27S pre-rRNA P
IMP
SceS000004947
GO:0040007 growth P
IMP
CelWBGene00004418
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004418
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000004947
GO:0043037 translation P
IDA
SceS000003044
ISS
SpoSPAC664.06
SPAC3H5.07
SPBC18H10.12c
TAS
SceS000006119

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
56307

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RLP7
(S000004947)
GI:6324326 P40693
Kluyveromyces lactis (Kla) RL7_KLULA GI:50306607
Eremothecium gossypii (Ego) AAL011C GI:45184813


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000004947
GO:0019843 rRNA binding F
ISS
SceS000004947
GO:0007046 ribosome biogenesis P
RCA
SceS000004947
GO:0030489 processing of 27S pre-rRNA P
IMP
SceS000004947
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000004947

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24773

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago176 AAL011C
Candida glabrata (Cgl) cgl2225 CAGL0H03773g
Debaryomyces hansenii (Dha) dha6226 DEHA0G11836g
Kluyveromyces lactis (Kla) kla2276 KLLA0D04884g
Saccharomyces cerevisiae (Sce) sce5110 YNL002C
(S000004947)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000004947
GO:0019843 rRNA binding F
ISS
SceS000004947
GO:0007046 ribosome biogenesis P
RCA
SceS000004947
GO:0030489 processing of 27S pre-rRNA P
IMP
SceS000004947
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000004947

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