YOGY Home YOGY Help

Search term: YLL039C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UBI4
SGD link S000003962
Alternative ID YLL039C
Description Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response
Synonyms YLL039C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0001 ACDHYPE

KOGs classification KOGs description
O
CELLULAR PROCESSES AND SIGNALING
Posttranslational modification, protein turnover, chaperones
R
POORLY CHARACTERIZED
General function prediction only
Ubiquitin and ubiquitin-like proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g31340 GI:15221683
Arabidopsis thaliana (Ath) At1g53930 GI:15220991 Q9SYE9
Arabidopsis thaliana (Ath) At1g53950 GI:15220997
Arabidopsis thaliana (Ath) At1g53980 GI:15221001 Q9SYF4
Arabidopsis thaliana (Ath) At1g64470 GI:15217656 Q6NLD9
Arabidopsis thaliana (Ath) At1g65350 GI:15218646
Arabidopsis thaliana (Ath) At2g32350 GI:15225231 Q9ZV63
Arabidopsis thaliana (Ath) At2g46500_1 GI:18407090 Q9ZPY9
Arabidopsis thaliana (Ath) At3g09790 GI:18398638 Q39256
Arabidopsis thaliana (Ath) At4g01000_1 GI:15234038 Q9SV28
Arabidopsis thaliana (Ath) At4g02890 GI:18412077 Q8H0Y0
Arabidopsis thaliana (Ath) At4g02950 GI:15236225 Q9ZT93
Arabidopsis thaliana (Ath) At4g02970 GI:15236228 Q9ZT95
Arabidopsis thaliana (Ath) At4g03350 GI:15236289 Q9ZQZ6
Arabidopsis thaliana (Ath) At4g03360 GI:15236291 Q9ZQZ5
Arabidopsis thaliana (Ath) At4g03370 GI:15236292 Q9ZQZ4
Arabidopsis thaliana (Ath) At4g05050 GI:18412785 Q8H0Y0
Arabidopsis thaliana (Ath) At4g05230 GI:15234664 Q9M0X2
Arabidopsis thaliana (Ath) At4g05240 GI:15234665 Q9M0X1
Arabidopsis thaliana (Ath) At4g05250 GI:15234692 Q9M0X0
Arabidopsis thaliana (Ath) At4g05260 GI:15234695 Q9M0W9
Arabidopsis thaliana (Ath) At4g05270 GI:15234698 Q9M0W8
Arabidopsis thaliana (Ath) At4g05310 GI:15234730 Q9M0W4
Arabidopsis thaliana (Ath) At4g05320 GI:7267292 Q9M0W3
Arabidopsis thaliana (Ath) At5g03240 GI:11275233
Arabidopsis thaliana (Ath) At5g09340 GI:15242392 Q9FY81
Arabidopsis thaliana (Ath) At5g20620 GI:18420267
Arabidopsis thaliana (Ath) At5g24240_1 GI:15237921 Q9FNF8
Arabidopsis thaliana (Ath) At5g37640 GI:18421671 Q9FHQ6
Caenorhabditis elegans (Cel) CE01921
(WBGene00006727)
GI:17554760
Caenorhabditis elegans (Cel) CE06878_1 GI:17563246 Q18231
Caenorhabditis elegans (Cel) CE08215_2 GI:17531835 P91057
Caenorhabditis elegans (Cel) CE08216_2 GI:17531837 P91056
Caenorhabditis elegans (Cel) CE08222_2 GI:17531849 P91050
Caenorhabditis elegans (Cel) CE08223_2 GI:17531851
Caenorhabditis elegans (Cel) CE08224_2 GI:17531853 P91052
Caenorhabditis elegans (Cel) CE08225_2 GI:17531855 P91053
Caenorhabditis elegans (Cel) CE10806 GI:17534229
Caenorhabditis elegans (Cel) CE10808 GI:17534231
Caenorhabditis elegans (Cel) CE16986
(WBGene00017459)
GI:17533203 O44803
Caenorhabditis elegans (Cel) CE17096
(WBGene00018661)
GI:17534233 O44819
Drosophila melanogaster (Dme) 7290696 GI:7290696 Q9W417
Drosophila melanogaster (Dme) 7292401 GI:7292401
Drosophila melanogaster (Dme) 7300339 GI:7300339 Q9VEC8
Homo sapiens (Hsa) Hs11024714
(UBB)
GI:11024714 Q5U5U6
Homo sapiens (Hsa) Hs11321577_2
(OASL)
GI:11321577 Q15646
Homo sapiens (Hsa) Hs14741660_1 GI:14741660
Homo sapiens (Hsa) Hs16163829 GI:16163829
Homo sapiens (Hsa) Hs18549673 GI:18549673
Homo sapiens (Hsa) Hs18553707_1 GI:18553707
Homo sapiens (Hsa) Hs20473312 GI:17487291
Homo sapiens (Hsa) Hs20482695 GI:20482695
Homo sapiens (Hsa) Hs20532982 GI:20532982
Homo sapiens (Hsa) Hs20535238 GI:20535238
Homo sapiens (Hsa) Hs20539785 GI:20539785
Homo sapiens (Hsa) Hs20558634 GI:20558634
Homo sapiens (Hsa) Hs22064818 GI:17481486
Homo sapiens (Hsa) Hs4503659_1
(FAU)
GI:4503659 P35544
Homo sapiens (Hsa) Hs4826774
(ISG15)
GI:4826774 P05161
Homo sapiens (Hsa) Hs5454144
(UBD)
GI:5454144 O15205
Homo sapiens (Hsa) Hs7657667
(UBL4A)
GI:7657667 P11441
Saccharomyces cerevisiae (Sce) YDR139c
(S000002546)
GI:9755329 Q03919
Saccharomyces cerevisiae (Sce) YLL039c
(S000003962)
GI:6322989 P61864
Schizosaccharomyces pombe (Spo) SPBC337.08c GI:19112201 P0C014
Encephalitozoon cuniculi (Ecu) ECU02g0740i GI:19073994 Q8SWD4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g53930
At4g05240
At1g53950
At4g05260
At4g01000
At2g46500
At1g31340
HsaP35544
GO:0005615 extracellular space C
NAS
HsaP05161
GO:0005622 intracellular C
TAS
AthAt1g65350
At3g09790
At5g03240
At5g37640
GO:0005730 nucleolus C
TAS
HsaQ15646
GO:0005737 cytoplasm C
IC
SceS000003962
IDA
SceS000002546
NAS
HsaP05161
TAS
HsaQ15646
GO:0003674 molecular_function F
ND
AthAt1g53950
At1g53930
At4g05260
At4g05250
At4g03360
At4g05240
At4g03370
HsaP35544
GO:0003677 DNA binding F
TAS
HsaQ15646
GO:0003725 double-stranded RNA binding F
TAS
HsaQ15646
GO:0004428 inositol or phosphatidylinositol kinase
activity
F
RCA
AthAt2g46500
GO:0005515 protein binding F
IDA
AthAt1g31340
NAS
HsaP05161
RCA
AthAt5g20620
At4g05320
At5g03240
At4g05050
At4g02890
TAS
AthAt5g03240
GO:0008639 small protein conjugating enzyme
activity
F
TAS
HsaP11441
GO:0031386 protein tag F
IDA
SceS000002546
ISS
SceS000003962
S000002546
NAS
SpoSPBC337.08c
GO:0043008 ATP-dependent protein binding F
TAS
SceS000003962
GO:0046966 thyroid hormone receptor binding F
TAS
HsaQ15646
GO:0000003 reproduction P
IMP
CelWBGene00018661
WBGene00006727
WBGene00004499
GO:0000209 protein polyubiquitination P
TAS
SceS000003962
GO:0006464 protein modification P
RCA
AthAt4g05050
At4g05320
At1g53950
At1g53930
At1g31340
At4g02890
At5g03240
At5g20620
TAS
AthAt4g05320
HsaP11441
GO:0006508 proteolysis P
NAS
HsaO15205
GO:0006511 ubiquitin-dependent protein catabolism P
ISS
AthAt5g37640
At5g03240
At4g02890
At1g65350
At3g09790
TAS
AthAt5g20620
GO:0006512 ubiquitin cycle P
IDA
HsaP05161
RCA
AthAt1g53950
At4g05250
At4g03370
At4g03360
At4g05260
At1g53930
At4g01000
At4g05240
At2g46500
GO:0006513 protein monoubiquitination P
TAS
SceS000003962
GO:0006950 response to stress P
TAS
SceS000003962
GO:0007126 meiosis P
IMP
SpoSPBC337.08c
GO:0007267 cell-cell signaling P
NAS
HsaP05161
GO:0007568 aging P
IEP
AthAt4g05320
GO:0007582 physiological process P
IMP
CelWBGene00006727
GO:0008150 biological_process P
ND
HsaQ15646
P35544
GO:0009751 response to salicylic acid stimulus P
IEP
AthAt4g05320
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00018661
WBGene00006727
WBGene00015852
WBGene00017459
WBGene00015842
WBGene00015851
GO:0010224 response to UV-B P
IEP
AthAt5g03240
GO:0016567 protein ubiquitination P
IMP
SceS000003962
NAS
SpoSPBC337.08c
GO:0016579 protein deubiquitination P
NAS
SpoSPBC337.08c
TAS
SceS000003962
GO:0019735 antimicrobial humoral response (sensu
Vertebrata)
P
TAS
HsaO15205
GO:0030437 sporulation (sensu Fungi) P
TAS
SceS000003962
GO:0032020 ISG15-protein conjugation P
IDA
HsaP05161
GO:0040007 growth P
IMP
CelWBGene00006727
WBGene00004499
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004499
GO:0042787 protein ubiquitination during ubiquitin-dependent
protein catabolism
P
RCA
AthAt5g20620
GO:0045116 protein neddylation P
IDA
SceS000002546
IGI
SceS000002546

Back to the top

Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000003962

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000003962
(YLL039C)
Anopheles gambiae (Aga) 89 1 ENSANGP00000028450
Canis familiaris (Cfa) 91 1 ENSCAFP00000010342
Danio rerio (Dre) 59 1 ENSDARP00000016378
Danio rerio (Dre) 59 1 ENSDARP00000030819
Danio rerio (Dre) 59 1 ENSDARP00000030962
Danio rerio (Dre) 59 0.274 ENSDARP00000004793
(im:6892314)
Q6TLG3
Takifugu rubripes (Fru) 228 1 SINFRUP00000137633
Gallus gallus (Gga) 136 1 ENSGALP00000007170
(LOC396425)
Q91021
Homo sapiens (Hsa) 96 1 ENSP00000344818
(RPS27A)
Q96MH4
Mus musculus (EMM) 155 1 ENSMUSP00000008492
(MGI:98889)
Q8R0Z9
Mus musculus (EMM) 155 1 ENSMUSP00000019649
(MGI:98889)
Q6NZC5
Pan troglodytes (Ptr) 270 1 ENSPTRP00000015011
Rattus norvegicus (ERN) 82 1 ENSRNOP00000001274
Caenorhabditis elegans (Cel) 70 1 WBGene00006727
(CE01921)
Dictyostelium discoideum (Ddi) 85 1 DDB0201651
Dictyostelium discoideum (Ddi) 85 1 DDB0214921
Dictyostelium discoideum (Ddi) 85 0.771 DDB0214920
Dictyostelium discoideum (Ddi) 85 0.743 DDB0218177
Drosophila melanogaster (Dme) 89 1 CG11624-PA
(FBgn0003943)
Drosophila melanogaster (Dme) 89 1 CG32744-PA
(FBgn0052744)
Mus musculus (Mmu) 89 1 MGI:98889 P62991
Oryza sativa (Osa) 54 1 Q40641 Q40641
Oryza sativa (Osa) 54 1 Q653X6 Q653X6
Oryza sativa (Osa) 54 1 Q6H7T6 Q6H7T6
Oryza sativa (Osa) 54 0.063 Q7XN78 Q7XN78
Rattus norvegicus (Rno) 73 1 RGD:621244
Schizosaccharomyces pombe (Spo) 188 1 SPBC337.08c P0C014
Arabidopsis thaliana (Ath) 70 1 NP_568397
(At5g20620.1)
Arabidopsis thaliana (Ath) 70 1 NP_849299
(At4g05320.2)
Q9M0W3
Arabidopsis thaliana (Ath) 70 1 NP_849301
(At4g05320.4)
Arabidopsis thaliana (Ath) 70 0.146 NP_567291
(At4g05320.1)
Arabidopsis thaliana (Ath) 70 0.146 NP_849300
(At4g05320.3)
Plasmodium falciparum (Pfa) 32 1 PFL0585w