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Search term: YKR060W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UTP30
SGD link S000001768
Alternative ID YKR060W
Description Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis of large-scale protein-protein interaction data
Synonyms YKR060W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1685 ACDHYP-

KOGs classification KOGs description
S
POORLY CHARACTERIZED
Function unknown
Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g06380 GI:15221475 Q9LMI1
Arabidopsis thaliana (Ath) At2g42650 GI:15227974 Q8S8D2
Arabidopsis thaliana (Ath) At3g58660 GI:15231102 Q9LXT5
Caenorhabditis elegans (Cel) CE20849
(WBGene00009993)
GI:17561330 Q20720
Drosophila melanogaster (Dme) 7297428 GI:7297428 Q9VLK2
Homo sapiens (Hsa) Hs22069700 GI:22069700
Saccharomyces cerevisiae (Sce) YHR052w
(S000001094)
GI:6321843 P38779
Saccharomyces cerevisiae (Sce) YKR060w
(S000001768)
GI:6322913 P36144
Schizosaccharomyces pombe (Spo) SPAC8F11.04 GI:19114865 Q9UT32
Schizosaccharomyces pombe (Spo) SPCC306.07c GI:19075315 Q9Y7R7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex (sensu Eukaryota) C
IDA
SceS000001094
IPI
SceS000001094
ISS
SpoSPCC306.07c
GO:0005634 nucleus C
IDA
SceS000001768
SpoSPCC306.07c
ISS
SpoSPAC8F11.04
GO:0005730 nucleolus C
IDA
SceS000001768
S000001094
SpoSPAC8F11.04
SPCC306.07c
ISS
SpoSPAC8F11.04
SPCC306.07c
GO:0003674 molecular_function F
ND
SceS000001768
GO:0030674 protein binding, bridging F
IMP
SceS000001094
IPI
SceS000001094
GO:0000003 reproduction P
IMP
CelWBGene00009993
GO:0006365 35S primary transcript processing P
RCA
SceS000001768
GO:0007046 ribosome biogenesis P
RCA
SceS000001768
S000001094
GO:0007582 physiological process P
IMP
CelWBGene00009993
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00009993
GO:0030163 protein catabolism P
IDA
SceS000001094
IMP
SceS000001094
IPI
SceS000001094
ISS
SpoSPCC306.07c
GO:0030490 processing of 20S pre-rRNA P
ISS
SpoSPAC8F11.04
GO:0040007 growth P
IMP
CelWBGene00009993
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00009993
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00009993
GO:0042273 ribosomal large subunit biogenesis P
IPI
SceS000001094
ISS
SpoSPCC306.07c

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000001768

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000001768
(YKR060W)
Canis familiaris (Cfa) 2084 1 ENSCAFP00000027826
Canis familiaris (Cfa) 2084 0.788 ENSCAFP00000012424
Gallus gallus (Gga) 1800 1 ENSGALP00000004521
(RCJMB04_6h9)
Homo sapiens (Hsa) 2063 1 ENSP00000307204


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001768
GO:0005730 nucleolus C
IDA
SceS000001768
GO:0003674 molecular_function F
ND
SceS000001768
GO:0006365 35S primary transcript processing P
RCA
SceS000001768
GO:0007046 ribosome biogenesis P
RCA
SceS000001768

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39601

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) UTP30
(S000001768)
GI:6322913 P36144
Kluyveromyces lactis (Kla) KLLA0A05753g GI:50302641 Q6CXT3
Eremothecium gossypii (Ego) ACR252C GI:45185938


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001768
GO:0005730 nucleolus C
IDA
SceS000001768
GO:0003674 molecular_function F
ND
SceS000001768
GO:0006365 35S primary transcript processing P
RCA
SceS000001768
GO:0007046 ribosome biogenesis P
RCA
SceS000001768

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20795

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago1299 ACR252C
Candida glabrata (Cgl) cgl2178 CAGL0H02673g
Debaryomyces hansenii (Dha) dha4778 DEHA0F08921g
Kluyveromyces lactis (Kla) kla253 KLLA0A05753g
Saccharomyces cerevisiae (Sce) sce3959 YKR060W
(S000001768)
Yarrowia lipolytica (Yli) yli6201 YALI0F20438g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001768
GO:0005730 nucleolus C
IDA
SceS000001768
GO:0003674 molecular_function F
ND
SceS000001768
GO:0006365 35S primary transcript processing P
RCA
SceS000001768
GO:0007046 ribosome biogenesis P
RCA
SceS000001768

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC306.07c
(Q9Y7R7)
YKR060W
(S000001768)
SPAC8F11.04
(Q9UT32)
YKR060W
(S000001768)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex (sensu Eukaryota) C
ISS
SpoSPCC306.07c
GO:0005634 nucleus C
IDA
SceS000001768
SpoSPCC306.07c
ISS
SpoSPAC8F11.04
GO:0005730 nucleolus C
IDA
SceS000001768
SpoSPAC8F11.04
SPCC306.07c
ISS
SpoSPAC8F11.04
SPCC306.07c
GO:0003674 molecular_function F
ND
SceS000001768
GO:0006365 35S primary transcript processing P
RCA
SceS000001768
GO:0007046 ribosome biogenesis P
RCA
SceS000001768
GO:0030163 protein catabolism P
ISS
SpoSPCC306.07c
GO:0030490 processing of 20S pre-rRNA P
ISS
SpoSPAC8F11.04
GO:0042273 ribosomal large subunit biogenesis P
ISS
SpoSPCC306.07c

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GO info in one table:

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