YOGY Home YOGY Help

Search term: YJR065C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARP3
SGD link S000003826
Alternative ID YJR065C
Description Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity
Synonyms YJR065C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0678 ACDHYP-

KOGs classification KOGs description
Z
CELLULAR PROCESSES AND SIGNALING
Cytoskeleton
Actin-related protein Arp2/3 complex, subunit Arp3

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g13180 GI:15222206 Q9SAF1
Caenorhabditis elegans (Cel) CE25554
(WBGene00000199)
GI:17510483 Q9N4I0
Drosophila melanogaster (Dme) 7295163
(FBgn0011744)
GI:17737543 P32392
Homo sapiens (Hsa) Hs17452477 GI:17452477
Homo sapiens (Hsa) Hs17476539_2 GI:17476539
Homo sapiens (Hsa) Hs17486134 GI:17486134
Homo sapiens (Hsa) Hs18593705_1 GI:18593705
Homo sapiens (Hsa) Hs20542789 GI:20542789
Homo sapiens (Hsa) Hs20542881_2 GI:20542881
Homo sapiens (Hsa) Hs22042491 GI:22042491
Homo sapiens (Hsa) Hs22069325 GI:22069325
Homo sapiens (Hsa) Hs22069628 GI:22069628
Homo sapiens (Hsa) Hs5031573
(ACTR3)
GI:5031573 P61158
Homo sapiens (Hsa) Hs9966913
(ACTR3B)
GI:9966913 Q9P1U1
Saccharomyces cerevisiae (Sce) YJR065c
(S000003826)
GI:6322525 P47117
Schizosaccharomyces pombe (Spo) SPAC630.03 GI:19113810 P32390


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC630.03
GO:0005829 cytosol C
IDA
SpoSPAC630.03
GO:0005856 cytoskeleton C
NR
HsaQ9P1U1
GO:0005884 actin filament C
ISS
DmeFBgn0011744
GO:0005885 Arp2/3 protein complex C
IDA
SceS000003826
ISS
DmeFBgn0011744
SpoSPAC630.03
NAS
DmeFBgn0011744
TAS
HsaP61158
GO:0015629 actin cytoskeleton C
NAS
DmeFBgn0011744
GO:0030479 actin cortical patch C
IDA
SpoSPAC630.03
GO:0003779 actin binding F
ISS
DmeFBgn0011744
TAS
SceS000003826
GO:0005200 structural constituent of cytoskeleton F
ISS
DmeFBgn0011744
RCA
AthAt1g13180
TAS
SceS000003826
GO:0005515 protein binding F
IPI
SpoSPAC630.03
GO:0005524 ATP binding F
IDA
SceS000003826
IMP
SceS000003826
GO:0051015 actin filament binding F
NR
HsaQ9P1U1
GO:0000001 mitochondrion inheritance P
TAS
SceS000003826
GO:0000915 cytokinesis, contractile ring formation P
IMP
SpoSPAC630.03
GO:0006928 cell motility P
TAS
HsaP61158
GO:0007010 cytoskeleton organization and biogenesis P
ISS
DmeFBgn0011744
GO:0007015 actin filament organization P
IMP
SceS000003826
GO:0007303 cytoplasmic transport, nurse cell to
oocyte
P
IMP
DmeFBgn0011744
GO:0007413 axonal fasciculation P
IMP
DmeFBgn0011744
GO:0008064 regulation of actin polymerization and/or
depolymerization
P
NAS
DmeFBgn0011744
GO:0008335 ovarian ring canal stabilization P
IMP
DmeFBgn0011744
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00000199
GO:0030037 actin filament reorganization during cell
cycle
P
IPI
DmeFBgn0011744
GO:0030041 actin filament polymerization P
NR
HsaQ9P1U1
GO:0030467 establishment and/or maintenance of cell polarity
(sensu Fungi)
P
IMP
SpoSPAC630.03
GO:0030589 pseudocleavage (sensu Insecta) P
IPI
DmeFBgn0011744
GO:0030833 regulation of actin filament polymerization P
IMP
SpoSPAC630.03

Back to the top

Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000003826

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000003826
(YJR065C)
Anopheles gambiae (Aga) 215 1 ENSANGP00000009943
Canis familiaris (Cfa) 229 1 ENSCAFP00000007401
Canis familiaris (Cfa) 229 0.762 ENSCAFP00000007416
Danio rerio (Dre) 284 1 ENSDARP00000021292
Takifugu rubripes (Fru) 219 1 SINFRUP00000136227
Takifugu rubripes (Fru) 219 0.981 SINFRUP00000155736
Gallus gallus (Gga) 201 1 ENSGALP00000010150
(ACTR3B)
Gallus gallus (Gga) 201 0.817 ENSGALP00000019832
(ACTR3)
Q90WD0
Homo sapiens (Hsa) 242 1 ENSP00000256001
(ACTR3B)
Q59GD5
Homo sapiens (Hsa) 242 1 ENSP00000263238
(ACTR3)
P61158
Mus musculus (EMM) 234 1 ENSMUSP00000027579
(MGI:1921367)
Q99JY9
Mus musculus (EMM) 234 0.706 ENSMUSP00000067564
(MGI:2661120)
Q7TSH1
Pan troglodytes (Ptr) 191 1 ENSPTRP00000021215
Pan troglodytes (Ptr) 191 0.099 ENSPTRP00000037779
Rattus norvegicus (ERN) 222 1 ENSRNOP00000030333
Rattus norvegicus (ERN) 222 0.677 ENSRNOP00000004520
(RGD:71024)
Q4V7C7
Caenorhabditis elegans (Cel) 208 1 WBGene00000199
(CE25554)
Q9N4I0
Dictyostelium discoideum (Ddi) 221 1 DDB0219936
Drosophila melanogaster (Dme) 227 1 CG7558-PA
(FBgn0011744)
Mus musculus (Mmu) 228 1 MGI:1921367 Q3TGE1
Mus musculus (Mmu) 228 0.648 MGI:2661120 Q641P0
Oryza sativa (Osa) 207 1 Q6K908 Q6K908
Schizosaccharomyces pombe (Spo) 289 1 SPAC630.03 P32390
Arabidopsis thaliana (Ath) 241 1 NP_172777
(At1g13180.1)
Q9SAF1


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2661120
GO:0005625 soluble fraction C
IDA
DdiDDB0219936
GO:0005626 insoluble fraction C
IDA
DdiDDB0219936
GO:0005737 cytoplasm C
IDA
SpoSPAC630.03
GO:0005829 cytosol C
IDA
SpoSPAC630.03
GO:0005884 actin filament C
ISS
DmeFBgn0011744
GO:0005885 Arp2/3 protein complex C
IDA
DdiDDB0219936
SceS000003826
ISS
DmeFBgn0011744
SpoSPAC630.03
NAS
DmeFBgn0011744
TAS
HsaP61158
GO:0015629 actin cytoskeleton C
ISS
RnoRGD:71024
NAS
DmeFBgn0011744
RCA
MmuMGI:1921367
GO:0030027 lamellipodium C
IDA
MmuMGI:1921367
ISS
RnoRGD:71024
GO:0030175 filopodium C
IDA
DdiDDB0219936
GO:0030479 actin cortical patch C
IDA
SpoSPAC630.03
GO:0030864 cortical actin cytoskeleton C
IDA
DdiDDB0219936
GO:0031252 leading edge C
IDA
DdiDDB0219936
GO:0045335 phagocytic vesicle C
IDA
DdiDDB0219936
GO:0003674 molecular_function F
ND
MmuMGI:2661120
GO:0003779 actin binding F
ISS
DmeFBgn0011744
TAS
SceS000003826
GO:0005200 structural constituent of cytoskeleton F
ISS
DmeFBgn0011744
RnoRGD:71024
RCA
AthAt1g13180
MmuMGI:1921367
TAS
SceS000003826
GO:0005515 protein binding F
IPI
MmuMGI:1921367
SpoSPAC630.03
ISS
RnoRGD:71024
GO:0005524 ATP binding F
IDA
SceS000003826
IMP
SceS000003826
GO:0030554 adenyl nucleotide binding F
ISS
DdiDDB0219936
GO:0051015 actin filament binding F
TAS
DdiDDB0219936
GO:0000001 mitochondrion inheritance P
TAS
SceS000003826
GO:0000915 cytokinesis, contractile ring formation P
IMP
SpoSPAC630.03
GO:0006928 cell motility P
TAS
DdiDDB0219936
HsaP61158
GO:0007010 cytoskeleton organization and biogenesis P
ISS
DmeFBgn0011744
GO:0007015 actin filament organization P
IMP
SceS000003826
GO:0007303 cytoplasmic transport, nurse cell to
oocyte
P
IMP
DmeFBgn0011744
GO:0007413 axonal fasciculation P
IMP
DmeFBgn0011744
GO:0008064 regulation of actin polymerization and/or
depolymerization
P
NAS
DmeFBgn0011744
GO:0008150 biological_process P
ND
MmuMGI:2661120
GO:0008335 ovarian ring canal stabilization P
IMP
DmeFBgn0011744
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00000199
GO:0030037 actin filament reorganization during cell
cycle
P
IPI
DmeFBgn0011744
GO:0030041 actin filament polymerization P
TAS
DdiDDB0219936
GO:0030467 establishment and/or maintenance of cell polarity
(sensu Fungi)
P
IMP
SpoSPAC630.03
GO:0030589 pseudocleavage (sensu Insecta) P
IPI
DmeFBgn0011744
GO:0030833 regulation of actin filament polymerization P
IMP
SpoSPAC630.03
GO:0030838 positive regulation of actin filament
polymerization
P
IGI
DdiDDB0219936
GO:0045010 actin nucleation P
TAS
DdiDDB0219936

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4180

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ACTR3B GI:9966913 Q9P1U1
Pan troglodytes (Ptr) ACTR3B GI:114616877
Canis familiaris (Cfa) LOC475549 GI:73979029
Mus musculus (Mmu) Actr3b
(MGI:2661120)
GI:52345394 Q641P0
Rattus norvegicus (Rno) RGD1565759_predicted
(RGD:1565759)
GI:62646620
Gallus gallus (Gga) ACTR3B GI:50732241
Schizosaccharomyces pombe (Spo) act2
(SPAC630.03)
GI:19113810 P32390
Saccharomyces cerevisiae (Sce) ARP3
(S000003826)
GI:6322525 P47117
Kluyveromyces lactis (Kla) KLLA0B13904g GI:50304401 Q6CV89
Eremothecium gossypii (Ego) AFR419C GI:45198937
Magnaporthe grisea (Mgr) MG03879.4 GI:39943736
Neurospora crassa (Ncr) GeneID:2709915 GI:32415431
Arabidopsis thaliana (Ath) DIS1 GI:15222206 Q9SAF1
Oryza sativa (Osa) OJ1568_B05.15 GI:50910107