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Search term: YJL180C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ATP12
SGD link S000003716
Alternative ID YJL180C
Description Conserved protein required for assembly of alpha and beta subunits into the F1 sector of mitochondrial F1F0 ATP synthase; mutation of human ATP12 reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency
Synonyms YJL180C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3015 ACDHYP-

KOGs classification KOGs description
C
METABOLISM
Energy production and conversion
F1-ATP synthase assembly protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g40660 GI:15237466 Q94BY8
Caenorhabditis elegans (Cel) CE23335 GI:17544454
Drosophila melanogaster (Dme) 7298774 GI:7298774 Q9VID7
Homo sapiens (Hsa) Hs17459138 GI:17459138
Homo sapiens (Hsa) Hs21735485
(ATPAF2)
GI:21735485 Q8N5M1
Saccharomyces cerevisiae (Sce) YJL180c
(S000003716)
GI:6322281 P22135
Schizosaccharomyces pombe (Spo) SPAC9.12c GI:19114267 Q9UT16


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003716
SpoSPAC9.12c
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC9.12c
GO:0005515 protein binding F
IPI
HsaQ8N5M1
GO:0019904 protein domain specific binding F
IPI
SceS000003716
GO:0051082 unfolded protein binding F
ISS
SpoSPAC9.12c
GO:0006461 protein complex assembly P
ISS
SpoSPAC9.12c
GO:0043461 F-type ATPase complex assembly P
IMP
SceS000003716
IPI
SceS000003716
NAS
HsaQ8N5M1

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000003716

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000003716
(YJL180C)
Anopheles gambiae (Aga) 1923 1 ENSANGP00000013879
Danio rerio (Dre) 1721 1 ENSDARP00000025670
Takifugu rubripes (Fru) 1959 1 SINFRUP00000141758
Gallus gallus (Gga) 1881 1 ENSGALP00000007866
(LOC416511)
Homo sapiens (Hsa) 2109 1 ENSP00000304017
(ATPAF2)
Mus musculus (EMM) 2014 1 ENSMUSP00000047801
(MGI:2180561)
Q91YY4
Pan troglodytes (Ptr) 1971 1 ENSPTRP00000015074
Rattus norvegicus (ERN) 1966 1 ENSRNOP00000004948
(RGD:1305161)
Caenorhabditis elegans (Cel) 1825 1 WBGene00013804
(CE37421)
Dictyostelium discoideum (Ddi) 1925 1 DDB0184519
Mus musculus (Mmu) 1979 1 MGI:2180561 Q91YY4
Oryza sativa (Osa) 1776 1 Q7F1Y6 Q7F1Y6
Rattus norvegicus (Rno) 1708 1 RGD:1305161
Schizosaccharomyces pombe (Spo) 1952 1 SPAC9.12c Q9UT16
Arabidopsis thaliana (Ath) 1988 1 NP_198882
(At5g40660.1)
Q94BY8


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2180561
GO:0005739 mitochondrion C
IDA
SceS000003716
SpoSPAC9.12c
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC9.12c
GO:0003674 molecular_function F
ND
MmuMGI:2180561
GO:0005515 protein binding F
ISS
MmuMGI:2180561
GO:0019904 protein domain specific binding F
IPI
SceS000003716
GO:0051082 unfolded protein binding F
ISS
SpoSPAC9.12c
GO:0006461 protein complex assembly P
ISS
SpoSPAC9.12c
GO:0008150 biological_process P
ND
MmuMGI:2180561
GO:0043461 F-type ATPase complex assembly P
IMP
SceS000003716
IPI
SceS000003716

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
34602

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ATPAF2 GI:21735485 Q8N5M1
Pan troglodytes (Ptr) ATPAF2 GI:114668880
Canis familiaris (Cfa) LOC489539 GI:57086735
Mus musculus (Mmu) Atpaf2
(MGI:2180561)
GI:21703852 Q91YY4
Rattus norvegicus (Rno) Atpaf2_predicted
(RGD:1305161)
GI:62656170
Gallus gallus (Gga) LOC416511 GI:50755603
Drosophila melanogaster (Dme) l(2)k14505
(FBgn0021856)
GI:24585626 Q9VID7
Anopheles gambiae (Aga) ENSANGG00000011390 GI:58392779 Q7PWR4
Caenorhabditis elegans (Cel) Y116A8C.27
(CE37421;
WBGene00013804)
GI:71995783 Q9U2U3
Schizosaccharomyces pombe (Spo) SPAC9.12c GI:19114267 Q9UT16
Saccharomyces cerevisiae (Sce) ATP12
(S000003716)
GI:6322281 P22135
Kluyveromyces lactis (Kla) KLLA0A06259g GI:50302687 Q6CXR0
Eremothecium gossypii (Ego) AEL140C GI:45190467
Magnaporthe grisea (Mgr) MG02782.4 GI:39970631 Q2KG00
Neurospora crassa (Ncr) GeneID:2706657 GI:32408751
Arabidopsis thaliana (Ath) AT5G40660 GI:15237466 Q94BY8
Oryza sativa (Osa) OJ1003_C06.112 GI:50939575


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2180561
GO:0005739 mitochondrion C
IDA
SceS000003716
SpoSPAC9.12c
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC9.12c
GO:0003674 molecular_function F
ND
MmuMGI:2180561
GO:0005515 protein binding F
IPI
HsaQ8N5M1
ISS
MmuMGI:2180561
GO:0019904 protein domain specific binding F
IPI
SceS000003716
GO:0051082 unfolded protein binding F
ISS
SpoSPAC9.12c
GO:0006461 protein complex assembly P
ISS
SpoSPAC9.12c
GO:0008150 biological_process P
ND
MmuMGI:2180561
GO:0043461 F-type ATPase complex assembly P
IMP
SceS000003716
IPI
SceS000003716
NAS
HsaQ8N5M1

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3851

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga10936 ENSANGP00000013879
Ashbya gossypii (Ago) ago2366 AEL140C
Arabidopsis thaliana (Ath) ath25842 At5g40660.1
Caenorhabditis elegans (Cel) cel17731 Y116A8C.27
(CE37421;
WBGene00013804)
Candida glabrata (Cgl) cgl1949 CAGL0G07513g
Cryptococcus neoformans (Cne) cne5421 179.m00274
Dictyostelium discoideum (Ddi) ddi11205 DDB0184519
Debaryomyces hansenii (Dha) dha1538 DEHA0C02398g
Drosophila melanogaster (Dme) dme3247 CG8674-PA
(FBgn0021856)
Danio rerio (Dre) dre3359 ENSDARP00000025670
Takifugu rubripes (Fru) fru7740 SINFRUP00000141758
Gallus gallus (Gga) gga6497 ENSGALP00000007866
(LOC416511)
Homo sapiens (Hsa) hsa13173 ENSP00000304017
(ATPAF2)
Kluyveromyces lactis (Kla) kla276 KLLA0A06259g
Mus musculus (Mmu) mmu3829 ENSMUSP00000047801
(MGI:2180561)
Q91YY4
Neurospora crassa (Ncr) ncr656 NCU00676.2
Oryza sativa (Osa) osa56652 6197.m00155
Rattus norvegicus (Rno) rno5174 ENSRNOP00000004948
(RGD:1305161)
Saccharomyces cerevisiae (Sce) sce3445 YJL180C
(S000003716)
Schizosaccharomyces pombe (Spo) spo2524 SPAC9.12c Q9UT16
Yarrowia lipolytica (Yli) yli2494 YALI0C19448g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2180561
GO:0005739 mitochondrion C
IDA
SceS000003716
SpoSPAC9.12c
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC9.12c
GO:0003674 molecular_function F
ND
MmuMGI:2180561
GO:0005515 protein binding F
ISS
MmuMGI:2180561
GO:0019904 protein domain specific binding F
IPI
SceS000003716
GO:0051082 unfolded protein binding F
ISS
SpoSPAC9.12c
GO:0006461 protein complex assembly P
ISS
SpoSPAC9.12c
GO:0008150 biological_process P
ND
MmuMGI:2180561
GO:0043461 F-type ATPase complex assembly P
IMP
SceS000003716
IPI
SceS000003716

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC9.12c
(Q9UT16)
YJL180C
(S000003716)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003716
SpoSPAC9.12c
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC9.12c
GO:0019904 protein domain specific binding F
IPI
SceS000003716
GO:0051082 unfolded protein binding F
ISS
SpoSPAC9.12c
GO:0006461 protein complex assembly P
ISS
SpoSPAC9.12c
GO:0043461 F-type ATPase complex assembly P
IMP
SceS000003716
IPI
SceS000003716

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk