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Search term: YJL090C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name DPB11
SGD link S000003626
Alternative ID YJL090C
Description Essential BRCT repeat protein, required on the prereplicative complex at replication origins for loading DNA polymerases to initiate DNA synthesis, also required for S/M checkpoint control
Synonyms YJL090C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1929 ACDHYPE

KOGs classification KOGs description
L
INFORMATION STORAGE AND PROCESSING
Replication, recombination and repair
Nucleotide excision repair factor NEF2, RAD4/CUT5 component

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g77320 GI:15223895 Q9FVX6
Arabidopsis thaliana (Ath) At4g02110 GI:15235233 O04251
Caenorhabditis elegans (Cel) CE05818 GI:17507231
Drosophila melanogaster (Dme) 7292915
(FBgn0002878)
GI:17864586 Q9VY97
Homo sapiens (Hsa) Hs20545800 GI:20545800
Homo sapiens (Hsa) Hs5902138
(TOPBP1)
GI:5902138 Q92547
Saccharomyces cerevisiae (Sce) YJL090c
(S000003626)
GI:6322371 P47027
Schizosaccharomyces pombe (Spo) SPAC23C4.18c GI:19114102 P32372
Encephalitozoon cuniculi (Ecu) ECU02g1320 GI:19074051 Q8SWA0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC23C4.18c
IDA
SpoSPAC23C4.18c
TAS
HsaQ92547
GO:0005657 replication fork C
IDA
SceS000003626
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0005816 spindle pole body C
IDA
SpoSPAC23C4.18c
GO:0005819 spindle C
IDA
SpoSPAC23C4.18c
GO:0005829 cytosol C
IDA
SpoSPAC23C4.18c
GO:0005515 protein binding F
IPI
SceS000003626
SpoSPAC23C4.18c
GO:0008022 protein C-terminus binding F
TAS
HsaQ92547
GO:0000076 DNA replication checkpoint P
IMP
SceS000003626
TAS
SpoSPAC23C4.18c
GO:0000077 DNA damage checkpoint P
IMP
SpoSPAC23C4.18c
TAS
SpoSPAC23C4.18c
GO:0000725 recombinational repair P
IDA
SceS000003626
IGI
SceS000003626
GO:0006270 DNA replication initiation P
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0006272 leading strand elongation P
TAS
SceS000003626
GO:0006273 lagging strand elongation P
TAS
SceS000003626
GO:0006281 DNA repair P
IDA
HsaQ92547
IMP
SpoSPAC23C4.18c
GO:0006289 nucleotide-excision repair P
TAS
SceS000003626
GO:0006298 mismatch repair P
NAS
SceS000003626
GO:0007067 mitosis P
TAS
DmeFBgn0002878
GO:0009993 oogenesis (sensu Insecta) P
TAS
DmeFBgn0002878
GO:0031574 S-M checkpoint P
IMP
SpoSPAC23C4.18c

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000003626

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000003626
(YJL090C)
Schizosaccharomyces pombe (Spo) 2282 1 SPAC23C4.18c P32372


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC23C4.18c
IDA
SpoSPAC23C4.18c
GO:0005657 replication fork C
IDA
SceS000003626
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0005816 spindle pole body C
IDA
SpoSPAC23C4.18c
GO:0005819 spindle C
IDA
SpoSPAC23C4.18c
GO:0005829 cytosol C
IDA
SpoSPAC23C4.18c
GO:0005515 protein binding F
IPI
SceS000003626
SpoSPAC23C4.18c
GO:0000076 DNA replication checkpoint P
IMP
SceS000003626
TAS
SpoSPAC23C4.18c
GO:0000077 DNA damage checkpoint P
IMP
SpoSPAC23C4.18c
TAS
SpoSPAC23C4.18c
GO:0000725 recombinational repair P
IDA
SceS000003626
IGI
SceS000003626
GO:0006270 DNA replication initiation P
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0006272 leading strand elongation P
TAS
SceS000003626
GO:0006273 lagging strand elongation P
TAS
SceS000003626
GO:0006281 DNA repair P
IMP
SpoSPAC23C4.18c
GO:0006289 nucleotide-excision repair P
TAS
SceS000003626
GO:0006298 mismatch repair P
NAS
SceS000003626
GO:0031574 S-M checkpoint P
IMP
SpoSPAC23C4.18c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
35878

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) rad4
(SPAC23C4.18c)
GI:19114102 P32372
Saccharomyces cerevisiae (Sce) DPB11
(S000003626)
GI:6322371 P47027
Kluyveromyces lactis (Kla) KLLA0F14300g GI:50311395 Q6CK17
Eremothecium gossypii (Ego) AFR095C GI:45198613
Magnaporthe grisea (Mgr) MG05040.4 GI:39940400
Neurospora crassa (Ncr) GeneID:2711777 GI:32418768


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC23C4.18c
IDA
SpoSPAC23C4.18c
GO:0005657 replication fork C
IDA
SceS000003626
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0005816 spindle pole body C
IDA
SpoSPAC23C4.18c
GO:0005819 spindle C
IDA
SpoSPAC23C4.18c
GO:0005829 cytosol C
IDA
SpoSPAC23C4.18c
GO:0005515 protein binding F
IPI
SceS000003626
SpoSPAC23C4.18c
GO:0000076 DNA replication checkpoint P
IMP
SceS000003626
TAS
SpoSPAC23C4.18c
GO:0000077 DNA damage checkpoint P
IMP
SpoSPAC23C4.18c
TAS
SpoSPAC23C4.18c
GO:0000725 recombinational repair P
IDA
SceS000003626
IGI
SceS000003626
GO:0006270 DNA replication initiation P
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0006272 leading strand elongation P
TAS
SceS000003626
GO:0006273 lagging strand elongation P
TAS
SceS000003626
GO:0006281 DNA repair P
IMP
SpoSPAC23C4.18c
GO:0006289 nucleotide-excision repair P
TAS
SceS000003626
GO:0006298 mismatch repair P
NAS
SceS000003626
GO:0031574 S-M checkpoint P
IMP
SpoSPAC23C4.18c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15201

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3287 AFR095C
Candida glabrata (Cgl) cgl4225 CAGL0L03410g
Debaryomyces hansenii (Dha) dha2431 DEHA0D03047g
Kluyveromyces lactis (Kla) kla4722 KLLA0F14300g
Neurospora crassa (Ncr) ncr9253 NCU09503.2
Saccharomyces cerevisiae (Sce) sce3350 YJL090C
(S000003626)
Schizosaccharomyces pombe (Spo) spo3121 SPAC23C4.18c P32372
Yarrowia lipolytica (Yli) yli4769 YALI0E21978g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC23C4.18c
IDA
SpoSPAC23C4.18c
GO:0005657 replication fork C
IDA
SceS000003626
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0005816 spindle pole body C
IDA
SpoSPAC23C4.18c
GO:0005819 spindle C
IDA
SpoSPAC23C4.18c
GO:0005829 cytosol C
IDA
SpoSPAC23C4.18c
GO:0005515 protein binding F
IPI
SceS000003626
SpoSPAC23C4.18c
GO:0000076 DNA replication checkpoint P
IMP
SceS000003626
TAS
SpoSPAC23C4.18c
GO:0000077 DNA damage checkpoint P
IMP
SpoSPAC23C4.18c
TAS
SpoSPAC23C4.18c
GO:0000725 recombinational repair P
IDA
SceS000003626
IGI
SceS000003626
GO:0006270 DNA replication initiation P
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0006272 leading strand elongation P
TAS
SceS000003626
GO:0006273 lagging strand elongation P
TAS
SceS000003626
GO:0006281 DNA repair P
IMP
SpoSPAC23C4.18c
GO:0006289 nucleotide-excision repair P
TAS
SceS000003626
GO:0006298 mismatch repair P
NAS
SceS000003626
GO:0031574 S-M checkpoint P
IMP
SpoSPAC23C4.18c

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC23C4.18c
(P32372)
YJL090C
(S000003626)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC23C4.18c
IDA
SpoSPAC23C4.18c
GO:0005657 replication fork C
IDA
SceS000003626
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0005816 spindle pole body C
IDA
SpoSPAC23C4.18c
GO:0005819 spindle C
IDA
SpoSPAC23C4.18c
GO:0005829 cytosol C
IDA
SpoSPAC23C4.18c
GO:0005515 protein binding F
IPI
SceS000003626
SpoSPAC23C4.18c
GO:0000076 DNA replication checkpoint P
IMP
SceS000003626
TAS
SpoSPAC23C4.18c
GO:0000077 DNA damage checkpoint P
IMP
SpoSPAC23C4.18c
TAS
SpoSPAC23C4.18c
GO:0000725 recombinational repair P
IDA
SceS000003626
IGI
SceS000003626
GO:0006270 DNA replication initiation P
ISS
SpoSPAC23C4.18c
TAS
SceS000003626
GO:0006272 leading strand elongation P
TAS
SceS000003626
GO:0006273 lagging strand elongation P
TAS
SceS000003626
GO:0006281 DNA repair P
IMP
SpoSPAC23C4.18c
GO:0006289 nucleotide-excision repair P
TAS
SceS000003626
GO:0006298 mismatch repair P
NAS
SceS000003626
GO:0031574 S-M checkpoint P
IMP
SpoSPAC23C4.18c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk