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Search term: YGR118W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS23A
SGD link S000003350
Alternative ID YGR118W
Description Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit, required for translational accuracy; nearly identical to Rps23Bp and similar to E. coli S12 and rat S23 ribosomal proteins; deletion of both RPS23A and RPS23B is lethal
Synonyms YGR118W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1749 ACDHYPE

KOGs classification KOGs description
J
INFORMATION STORAGE AND PROCESSING
Translation, ribosomal structure and biogenesis
40S ribosomal protein S23

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g09680 GI:6682246
Arabidopsis thaliana (Ath) At5g02960 GI:15242574 P49201
Caenorhabditis elegans (Cel) CE05747
(WBGene00004492)
GI:17542020 Q19877
Drosophila melanogaster (Dme) 7303214 GI:20129981
Homo sapiens (Hsa) Hs4506701
(RPS23)
GI:4506701 P62266
Homo sapiens (Hsa) Hs22042004 GI:22042004
Homo sapiens (Hsa) Hs20470197 GI:20470197
Saccharomyces cerevisiae (Sce) YGR118w
(S000003350)
GI:6321556 P32827
Saccharomyces cerevisiae (Sce) YPR132w
(S000006336)
GI:6321556 P32827
Schizosaccharomyces pombe (Spo) SPAC23C11.02c GI:19112979 P79057
Schizosaccharomyces pombe (Spo) SPBP4H10.13 GI:19112979 P79057
Encephalitozoon cuniculi (Ecu) ECU10g0400 GI:19074649 Q8SR65


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005730 nucleolus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005843 cytosolic small ribosomal subunit (sensu
Eukaryota)
C
IDA
HsaP62266
ISS
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000006336
S000003350
GO:0003735 structural constituent of ribosome F
IDA
HsaP62266
ISS
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000006336
S000003350
GO:0045182 translation regulator activity F
ISS
HsaP62266
GO:0000003 reproduction P
IMP
CelWBGene00004492
GO:0000723 telomere maintenance P
IMP
SceS000006336
S000003350
GO:0006450 regulation of translational fidelity P
IMP
SceS000006336
S000003350
GO:0007582 physiological process P
IMP
CelWBGene00004492
GO:0040007 growth P
IMP
CelWBGene00004492
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004492
GO:0043037 translation P
ISS
HsaP62266
SpoSPBP4H10.13
SPAC23C11.02c
TAS
SceS000006336
S000003350

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000003350

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000003350
(YGR118W)
Anopheles gambiae (Aga) 723 1 ENSANGP00000012229
Saccharomyces cerevisiae (Sce) 723 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 670 1 S000006336
(YPR132W)
Canis familiaris (Cfa) 810 1 ENSCAFP00000012672
Saccharomyces cerevisiae (Sce) 810 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 748 1 S000006336
(YPR132W)
Danio rerio (Dre) 1042 1 ENSDARP00000031315
Saccharomyces cerevisiae (Sce) 1042 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 858 1 S000006336
(YPR132W)
Takifugu rubripes (Fru) 858 1 SINFRUP00000163512
Gallus gallus (Gga) 697 1 ENSGALP00000025130
(LOC427323)
Saccharomyces cerevisiae (Sce) 697 1 S000006336
(YPR132W)
Homo sapiens (Hsa) 820 1 ENSP00000296674
(RPS23)
P62266
Saccharomyces cerevisiae (Sce) 820 1 S000006336
(YPR132W)
Homo sapiens (Hsa) 820 0.167 ENSP00000339028
Mus musculus (EMM) 816 1 ENSMUSP00000080710
Mus musculus (EMM) 816 1 ENSMUSP00000080726
Saccharomyces cerevisiae (Sce) 816 1 S000006336
(YPR132W)
Mus musculus (EMM) 816 0.917 ENSMUSP00000080156
Mus musculus (EMM) 816 0.283 ENSMUSP00000054490
(MGI:1913725)
Q9CZI5
Mus musculus (EMM) 816 0.117 ENSMUSP00000073503
(GI:668809)
Pan troglodytes (Ptr) 679 1 ENSPTRP00000029189
Saccharomyces cerevisiae (Sce) 679 1 S000006336
(YPR132W)
Pan troglodytes (Ptr) 679 0.159 ENSPTRP00000034964
Rattus norvegicus (ERN) 765 1 ENSRNOP00000022348
(RGD:621039)
P62268
Saccharomyces cerevisiae (Sce) 765 1 S000006336
(YPR132W)
Rattus norvegicus (ERN) 765 0.741 ENSRNOP00000003264
Rattus norvegicus (ERN) 765 0.741 ENSRNOP00000028281
Saccharomyces cerevisiae (Sce) 711 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 663 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 670 1 S000006336
(YPR132W)
Caenorhabditis elegans (Cel) 670 1 WBGene00004492
(CE05747)
Q19877
Dictyostelium discoideum (Ddi) 879 1 DDB0231062
Saccharomyces cerevisiae (Sce) 879 1 S000006336
(YPR132W)
Drosophila melanogaster (Dme) 745 1 CG8415-PA
(FBgn0033912)
Saccharomyces cerevisiae (Sce) 745 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 649 1 S000006336
(YPR132W)
Mus musculus (Mmu) 795 1 MGI:1913725 P62267
Saccharomyces cerevisiae (Sce) 795 1 S000006336
(YPR132W)
Oryza sativa (Osa) 640 1 Q8L4F2 Q8L4F2
Saccharomyces cerevisiae (Sce) 640 1 S000006336
(YPR132W)
Rattus norvegicus (Rno) 674 1 RGD:621039
Saccharomyces cerevisiae (Sce) 674 1 S000006336
(YPR132W)
Saccharomyces cerevisiae (Sce) 1279 1 S000006336
(YPR132W)
Schizosaccharomyces pombe (Spo) 1279 1 SPAC23C11.02c P79057
Schizosaccharomyces pombe (Spo) 1279 1 SPBP4H10.13 P79057
Arabidopsis thaliana (Ath) 779 1 NP_195916
(At5g02960.1)
P49201
Saccharomyces cerevisiae (Sce) 779 1 S000006336
(YPR132W)
Arabidopsis thaliana (Ath) 779 0.779 NP_566351
(At3g09680.1)
Q9SF35
Plasmodium falciparum (Pfa) 376 1 PFC0290w
Saccharomyces cerevisiae (Sce) 376 1 S000006336
(YPR132W)


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0005634 nucleus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005730 nucleolus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005840 ribosome C
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0005843 cytosolic small ribosomal subunit (sensu
Eukaryota)
C
IDA
HsaP62266
ISS
DdiDDB0231062
DmeFBgn0033912
PfaPFC0290w
RnoRGD:621039
SpoSPAC23C11.02c
SPBP4H10.13
RCA
MmuMGI:1913725
TAS
SceS000006336
S000003350
GO:0003676 nucleic acid binding F
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0003723 RNA binding F
ISS
DdiDDB0231062
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0003735 structural constituent of ribosome F
IDA
HsaP62266
ISS
DdiDDB0231062
DmeFBgn0033912
RnoRGD:621039
SpoSPAC23C11.02c
SPBP4H10.13
RCA
MmuMGI:1913725
TAS
SceS000006336
S000003350
GO:0045182 translation regulator activity F
ISS
HsaP62266
MmuMGI:1913725
GO:0000003 reproduction P
IMP
CelWBGene00004492
GO:0000723 telomere maintenance P
IMP
SceS000006336
S000003350
GO:0006412 protein biosynthesis P
ISS
DdiDDB0231062
DmeFBgn0033912
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0006450 regulation of translational fidelity P
IMP
SceS000006336
S000003350
GO:0007582 physiological process P
IMP
CelWBGene00004492
GO:0040007 growth P
IMP
CelWBGene00004492
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004492
GO:0043037 translation P
ISS
HsaP62266
MmuMGI:1913725
SpoSPBP4H10.13
SPAC23C11.02c
TAS
SceS000006336
S000003350

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
799

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS23 GI:4506701 P62266
Pan troglodytes (Ptr) LOC461767 GI:55624034
Canis familiaris (Cfa) LOC479159 GI:57084757
Mus musculus (Mmu) Rps23
(MGI:1913725)
GI:13195604 P62267
Rattus norvegicus (Rno) Rps23
(RGD:621039)
GI:17530965 P62268
Gallus gallus (Gga) LOC427323 GI:50761979
Drosophila melanogaster (Dme) RpS23
(FBgn0033912)
GI:22024141 Q8T3U2
Anopheles gambiae (Aga) ENSANGG00000009740 GI:58395907 Q7PXS7
Caenorhabditis elegans (Cel) rps-23
(CE05747;
WBGene00004492)
GI:17542020 Q19877
Schizosaccharomyces pombe (Spo) rps23-2
(SPBP4H10.13)
GI:19112979 P79057
Saccharomyces cerevisiae (Sce) RPS23A
(S000003350)
GI:6321556 P32827
Arabidopsis thaliana (Ath) AT5G02960 GI:15242574 P49201
Oryza sativa (Osa) OSJNBa0094J08.4 GI:50919443
Plasmodium falciparum (Pfa) MAL3P2.27 GI:16805163 O97248


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0005634 nucleus C
IDA
SpoSPBP4H10.13
GO:0005730 nucleolus C
IDA
SpoSPBP4H10.13
GO:0005840 ribosome C
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0005843 cytosolic small ribosomal subunit (sensu
Eukaryota)
C
IDA
HsaP62266
ISS
DmeFBgn0033912
RnoRGD:621039
SpoSPBP4H10.13
RCA
MmuMGI:1913725
TAS
SceS000003350
GO:0003676 nucleic acid binding F
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0003723 RNA binding F
ISS
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0003735 structural constituent of ribosome F
IDA
HsaP62266
ISS
DmeFBgn0033912
RnoRGD:621039
SpoSPBP4H10.13
RCA
MmuMGI:1913725
TAS
SceS000003350
GO:0045182 translation regulator activity F
ISS
HsaP62266
MmuMGI:1913725
GO:0000003 reproduction P
IMP
CelWBGene00004492
GO:0000723 telomere maintenance P
IMP
SceS000003350
GO:0006412 protein biosynthesis P
ISS
DmeFBgn0033912
RnoRGD:621039
RCA
MmuMGI:1913725
GO:0006450 regulation of translational fidelity P
IMP
SceS000003350
GO:0007582 physiological process P
IMP
CelWBGene00004492
GO:0040007 growth P
IMP
CelWBGene00004492
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004492
GO:0043037 translation P
ISS
HsaP62266
MmuMGI:1913725
SpoSPBP4H10.13
TAS
SceS000003350

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_996

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga3647 ENSANGP00000012229
Ashbya gossypii (Ago) ago294 AAR108C
Arabidopsis thaliana (Ath) ath13047 At3g09680.1
Arabidopsis thaliana (Ath) ath22448 At5g02960.1
Caenorhabditis elegans (Cel) cel7586 F28D1.7
(CE05747;
WBGene00004492)
Q19877
Candida glabrata (Cgl) cgl4290 CAGL0L04840g
Cryptococcus neoformans (Cne) cne4517 177.m03278
Dictyostelium discoideum (Ddi) ddi11613 DDB0231062
Debaryomyces hansenii (Dha) dha3633 DEHA0E08855g
Drosophila melanogaster (Dme) dme5035 CG8415-PA
(FBgn0033912)
Danio rerio (Dre) dre11987 ENSDARP00000031315
Danio rerio (Dre) dre11988 ENSDARP00000035273
Encephalitozoon cuniculi (Ecu) ecu565 19074649
Takifugu rubripes (Fru) fru17595 SINFRUP00000163512
Gallus gallus (Gga) gga28006 ENSGALP00000025130
(LOC427323)
Homo sapiens (Hsa) hsa25465 ENSP00000296674
(RPS23)
P62266
Kluyveromyces lactis (Kla) kla1027 KLLA0B11231g
Mus musculus (Mmu) mmu25774 ENSMUSP00000080156
Mus musculus (Mmu) mmu7343 ENSMUSP00000080710
Mus musculus (Mmu) mmu16537 ENSMUSP00000080726
Neurospora crassa (Ncr) ncr1507 NCU01552.2
Oryza sativa (Osa) osa32191 4448.m00143
Oryza sativa (Osa) osa34049 4659.m00172
Oryza sativa (Osa) osa34070 4659.m00219
Oryza sativa (Osa) osa62906 6683.m00181
Oryza sativa (Osa) osa63119 6700.m00180
Plasmodium falciparum (Pfa) pfa2723 PFC0290w
Rattus norvegicus (Rno) rno15329 ENSRNOP00000022348
(RGD:621039)
P62268
Rattus norvegicus (Rno) rno10368 ENSRNOP00000050533
Saccharomyces cerevisiae (Sce) sce2488 YGR118W
(S000003350)
Saccharomyces cerevisiae (Sce) sce6588 YPR132W
(S000006336)
Schizosaccharomyces pombe (Spo) spo3329 SPAC23C11.02c P79057
Schizosaccharomyces pombe (Spo) spo1844 SPBP4H10.13 P79057
Yarrowia lipolytica (Yli) yli717 YALI0A20746g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
RnoRGD:621039
GO:0005634 nucleus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005730 nucleolus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005840 ribosome C
ISS
RnoRGD:621039
GO:0005843 cytosolic small ribosomal subunit (sensu
Eukaryota)
C
IDA
HsaP62266
ISS
DdiDDB0231062
DmeFBgn0033912
PfaPFC0290w
RnoRGD:621039
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000006336
S000003350
GO:0003676 nucleic acid binding F
ISS
RnoRGD:621039
GO:0003723 RNA binding F
ISS
DdiDDB0231062
RnoRGD:621039
GO:0003735 structural constituent of ribosome F
IDA
HsaP62266
ISS
DdiDDB0231062
DmeFBgn0033912
RnoRGD:621039
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000006336
S000003350
GO:0045182 translation regulator activity F
ISS
HsaP62266
GO:0000003 reproduction P
IMP
CelWBGene00004492
GO:0000723 telomere maintenance P
IMP
SceS000006336
S000003350
GO:0006412 protein biosynthesis P
ISS
DdiDDB0231062
DmeFBgn0033912
RnoRGD:621039
GO:0006450 regulation of translational fidelity P
IMP
SceS000006336
S000003350
GO:0007582 physiological process P
IMP
CelWBGene00004492
GO:0040007 growth P
IMP
CelWBGene00004492
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004492
GO:0043037 translation P
ISS
HsaP62266
SpoSPBP4H10.13
SPAC23C11.02c
TAS
SceS000006336
S000003350

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBP4H10.13
(P79057)
YGR118W
(S000003350)
SPAC23C11.02c
(P79057)
YGR118W
(S000003350)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005730 nucleolus C
IDA
SpoSPBP4H10.13
SPAC23C11.02c
GO:0005843 cytosolic small ribosomal subunit (sensu
Eukaryota)
C
ISS
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000003350
GO:0003735 structural constituent of ribosome F
ISS
SpoSPAC23C11.02c
SPBP4H10.13
TAS
SceS000003350
GO:0000723 telomere maintenance P
IMP
SceS000003350
GO:0006450 regulation of translational fidelity P
IMP
SceS000003350
GO:0043037 translation P
ISS
SpoSPBP4H10.13
SPAC23C11.02c
TAS
SceS000003350