YOGY Home YOGY Help

Search term: YDR382W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPP2B
SGD link S000002790
Alternative ID YDR382W
Description Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm
Synonyms YDR382W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3449 ACDHYPE

KOGs classification KOGs description
J
INFORMATION STORAGE AND PROCESSING
Translation, ribosomal structure and biogenesis
60S acidic ribosomal protein P2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g27710 GI:15226230 Q9SLF7
Arabidopsis thaliana (Ath) At2g27720 GI:15226231 P51407
Arabidopsis thaliana (Ath) At3g28500 GI:15233009 Q9LH85
Arabidopsis thaliana (Ath) At3g44590 GI:15230454 Q9LXM8
Arabidopsis thaliana (Ath) At5g40040 GI:15242556 Q9LUK2
Caenorhabditis elegans (Cel) CE08616 GI:17505935
Caenorhabditis elegans (Cel) CE22694
(WBGene00004410)
GI:17543850 Q9U1X9
Drosophila melanogaster (Dme) 7302907
(FBgn0003274)
GI:17647887 P05389
Homo sapiens (Hsa) Hs17474464 GI:17474464
Homo sapiens (Hsa) Hs20545998_2 GI:20545998
Homo sapiens (Hsa) Hs20555798 GI:20555798
Homo sapiens (Hsa) Hs22066175_2 GI:22066175
Homo sapiens (Hsa) Hs4506671
(RPLP2)
GI:4506671 P05387
Saccharomyces cerevisiae (Sce) YDR382w
(S000002790)
GI:6320590 P02400
Saccharomyces cerevisiae (Sce) YOL039w
(S000005399)
GI:6324534 P05319
Schizosaccharomyces pombe (Spo) SPAC1071.08 GI:19115270 O14317
Schizosaccharomyces pombe (Spo) SPBC23G7.15c GI:19112665 P17478
Schizosaccharomyces pombe (Spo) SPBP8B7.06 GI:19113305 P08094
Encephalitozoon cuniculi (Ecu) ECU07g0110 GI:19074433 Q8SRM2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
GO:0005830 cytosolic ribosome (sensu Eukaryota) C
ISS
DmeFBgn0003274
NAS
DmeFBgn0003274
GO:0005840 ribosome C
RCA
AthAt2g27710
At5g40040
At3g44590
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
ISS
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
NAS
DmeFBgn0003274
TAS
HsaP05387
SceS000005399
S000002790
GO:0003723 RNA binding F
TAS
HsaP05387
GO:0003735 structural constituent of ribosome F
ISS
DmeFBgn0003274
SpoSPBC23G7.15c
SPAC1071.08
SPBP8B7.06
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At3g44590
At2g27710
TAS
HsaP05387
SceS000005399
S000002790
GO:0006412 protein biosynthesis P
ISS
DmeFBgn0003274
NAS
DmeFBgn0003274
TAS
HsaP05387
GO:0006414 translational elongation P
ISS
SceS000002790
S000005399
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At2g27710
At3g44590
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00004410
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004410
GO:0043037 translation P
TAS
SceS000002790
S000005399

Back to the top

Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000002790

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000002790
(YDR382W)
Anopheles gambiae (Aga) 1351 1 ENSANGP00000025118
Saccharomyces cerevisiae (Sce) 1351 0.086 S000005399
(YOL039W)
Saccharomyces cerevisiae (Sce) 1138 1 S000005399
(YOL039W)
Saccharomyces cerevisiae (Sce) 1258 0.115 S000005399
(YOL039W)
Canis familiaris (Cfa) 1514 1 ENSCAFP00000008431
Canis familiaris (Cfa) 1514 0.679 ENSCAFP00000014004
Saccharomyces cerevisiae (Sce) 1514 0.133 S000005399
(YOL039W)
Saccharomyces cerevisiae (Sce) 1465 0.206 S000005399
(YOL039W)
Danio rerio (Dre) 1300 1 ENSDARP00000022552
Saccharomyces cerevisiae (Sce) 1300 0.133 S000005399
(YOL039W)
Takifugu rubripes (Fru) 2006 1 SINFRUP00000143489
Saccharomyces cerevisiae (Sce) 2006 0.448 S000005399
(YOL039W)
Gallus gallus (Gga) 1354 1 ENSGALP00000023089
(RPLP2)
Saccharomyces cerevisiae (Sce) 1354 0.15 S000005399
(YOL039W)
Homo sapiens (Hsa) 1494 1 ENSP00000322419
(RPLP2)
P05387
Homo sapiens (Hsa) 1494 0.154 ENSP00000244491
Saccharomyces cerevisiae (Sce) 1494 0.086 S000005399
(YOL039W)
Mus musculus (EMM) 1484 1 ENSMUSP00000062852
Mus musculus (EMM) 1484 0.286 ENSMUSP00000026581
Saccharomyces cerevisiae (Sce) 1484 0.096 S000005399
(YOL039W)
Pan troglodytes (Ptr) 1323 1 ENSPTRP00000005534
Pan troglodytes (Ptr) 1323 0.163 ENSPTRP00000030460
Saccharomyces cerevisiae (Sce) 1323 0.086 S000005399
(YOL039W)
Rattus norvegicus (ERN) 1448 1 ENSRNOP00000011879
Rattus norvegicus (ERN) 1448 0.915 ENSRNOP00000003440
Saccharomyces cerevisiae (Sce) 1448 0.105 S000005399
(YOL039W)
Saccharomyces cerevisiae (Sce) 1364 0.105 S000005399
(YOL039W)
Saccharomyces cerevisiae (Sce) 1258 0.124 S000005399
(YOL039W)
Caenorhabditis elegans (Cel) 1259 1 WBGene00016493
(CE30433)
O01504
Saccharomyces cerevisiae (Sce) 1259 0.115 S000005399
(YOL039W)
Caenorhabditis elegans (Cel) 1259 0.113 WBGene00004410
(CE22694)
Dictyostelium discoideum (Ddi) 1596 1 DDB0191484
Saccharomyces cerevisiae (Sce) 1596 1 S000005399
(YOL039W)
Drosophila melanogaster (Dme) 1452 1 CG4918-PA
(FBgn0003274)
Saccharomyces cerevisiae (Sce) 1452 0.206 S000005399
(YOL039W)
Mus musculus (Mmu) 1444 1 MGI:1914436 P99027
Saccharomyces cerevisiae (Sce) 1444 0.086 S000005399
(YOL039W)
Oryza sativa (Osa) 1217 1 Q65WT5 Q65WT5
Oryza sativa (Osa) 1217 0.44 Q6H764 Q6H764
Oryza sativa (Osa) 1217 0.42 Q9LG79 Q9LG79
Saccharomyces cerevisiae (Sce) 1217 0.076 S000005399
(YOL039W)
Rattus norvegicus (Rno) 1245 1 RGD:621775
Saccharomyces cerevisiae (Sce) 1245 0.086 S000005399
(YOL039W)
Arabidopsis thaliana (Ath) 1496 1 NP_180339
(At2g27710.1)
Q9SLF7
Arabidopsis thaliana (Ath) 1496 1 NP_850106
(At2g27710.2)
Arabidopsis thaliana (Ath) 1496 1 NP_973549
(At2g27710.3)
Arabidopsis thaliana (Ath) 1496 0.92 NP_180340
(At2g27720.1)
P51407
Arabidopsis thaliana (Ath) 1496 0.384 NP_190045
(At3g44590.1)
Q9LXM8
Arabidopsis thaliana (Ath) 1496 0.384 NP_974384
(At3g44590.2)
Saccharomyces cerevisiae (Sce) 1496 0.183 S000005399
(YOL039W)
Arabidopsis thaliana (Ath) 1496 0.054 NP_198820
(At5g40040.1)
Q9LUK2
Plasmodium falciparum (Pfa) 883 1 PFC0400w
Saccharomyces cerevisiae (Sce) 883 0.298 S000005399
(YOL039W)


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005830 cytosolic ribosome (sensu Eukaryota) C
ISS
DmeFBgn0003274
NAS
DmeFBgn0003274
GO:0005840 ribosome C
ISS
RnoRGD:621775
RCA
AthAt2g27710
At5g40040
At3g44590
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
ISS
PfaPFC0400w
RnoRGD:621775
NAS
DmeFBgn0003274
TAS
HsaP05387
SceS000005399
S000002790
GO:0003723 RNA binding F
ISS
RnoRGD:621775
TAS
HsaP05387
GO:0003735 structural constituent of ribosome F
ISS
DmeFBgn0003274
RnoRGD:621775
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At3g44590
At2g27710
TAS
HsaP05387
SceS000005399
S000002790
GO:0006412 protein biosynthesis P
ISS
DmeFBgn0003274
RnoRGD:621775
NAS
DmeFBgn0003274
TAS
HsaP05387
GO:0006414 translational elongation P
ISS
SceS000002790
S000005399
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At2g27710
At3g44590
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00004410
WBGene00016493
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016493
WBGene00004410
GO:0043037 translation P
TAS
SceS000002790
S000005399

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68655

Species Gene ID NCBI link UniProt link
Canis familiaris (Cfa) LOC485529 GI:57103386
Mus musculus (Mmu) Rplp2
(MGI:1914436)
GI:83745120 P99027
Rattus norvegicus (Rno) Rplp2
(RGD:621775)
GI:71795613 P02401
Rattus norvegicus (Rno) LOC498555 GI:62661785
Caenorhabditis elegans (Cel) rpa-2
(CE22694;
WBGene00004410)
GI:17543850 Q9U1X9
Schizosaccharomyces pombe (Spo) SPAC1071.08 GI:19115270 O14317
Saccharomyces cerevisiae (Sce) RPP2B
(S000002790)
GI:6320590 P02400
Kluyveromyces lactis (Kla) KLLA0E02794g GI:50308147 Q6CPR5
Eremothecium gossypii (Ego) AFR145C GI:45198663
Magnaporthe grisea (Mgr) MG10827.4 GI:39941956
Neurospora crassa (Ncr) GeneID:2707028 GI:32409357
Arabidopsis thaliana (Ath) AT2G27720 GI:15226231 P51407
Oryza sativa (Osa) P0476H10.25 GI:50909175


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC1071.08
GO:0005840 ribosome C
ISS
RnoRGD:621775
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
ISS
RnoRGD:621775
SpoSPAC1071.08
TAS
SceS000002790
GO:0003723 RNA binding F
ISS
RnoRGD:621775
GO:0003735 structural constituent of ribosome F
ISS
RnoRGD:621775
SpoSPAC1071.08
TAS
SceS000002790
GO:0006412 protein biosynthesis P
ISS
RnoRGD:621775
GO:0006414 translational elongation P
ISS
SceS000002790
SpoSPAC1071.08
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00004410
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004410
GO:0043037 translation P
TAS
SceS000002790

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_573

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga5292 ENSANGP00000025118
Ashbya gossypii (Ago) ago2163 AEL342W
Ashbya gossypii (Ago) ago3337 AFR145C
Arabidopsis thaliana (Ath) ath9726 At2g27710.1
Arabidopsis thaliana (Ath) ath9727 At2g27710.2
Arabidopsis thaliana (Ath) ath9728 At2g27710.3
Arabidopsis thaliana (Ath) ath9729 At2g27720.1
Arabidopsis thaliana (Ath) ath15210 At3g28500.1
Arabidopsis thaliana (Ath) ath15725 At3g44590.1
Arabidopsis thaliana (Ath) ath15726 At3g44590.2
Arabidopsis thaliana (Ath) ath25776 At5g40040.1
Caenorhabditis elegans (Cel) cel3624 C37A2.7
(CE30433;
WBGene00016493)
O01504
Caenorhabditis elegans (Cel) cel20216 Y62E10A.1
(CE22694;
WBGene00004410)
Candida glabrata (Cgl) cgl132 CAGL0A03168g
Cryptococcus neoformans (Cne) cne1406 180.m00354
Dictyostelium discoideum (Ddi) ddi12489 DDB0191484
Debaryomyces hansenii (Dha) dha2174 DEHA0C16819g
Debaryomyces hansenii (Dha) dha6339 DEHA0G14344g
Drosophila melanogaster (Dme) dme5486 CG4918-PA
(FBgn0003274)
Drosophila melanogaster (Dme) dme5485 CG4918-PB
(FBgn0003274)
Danio rerio (Dre) dre13667 ENSDARP00000022552
Encephalitozoon cuniculi (Ecu) ecu1819 19074433
Takifugu rubripes (Fru) fru26937 SINFRUP00000143489
Gallus gallus (Gga) gga27132 ENSGALP00000023089
(RPLP2)
Gallus gallus (Gga) gga27133 ENSGALP00000023090
(RPLP2)
Homo sapiens (Hsa) hsa4913 ENSP00000322419
(RPLP2)
P05387
Kluyveromyces lactis (Kla) kla3073 KLLA0E02794g
Kluyveromyces lactis (Kla) kla4436 KLLA0F07865g
Mus musculus (Mmu) mmu5859 ENSMUSP00000062852
Neurospora crassa (Ncr) ncr951 NCU00979.2
Oryza sativa (Osa) osa4619 2114.m00184
Oryza sativa (Osa) osa9630 2709.m00155
Oryza sativa (Osa) osa55681 6166.m00037
Oryza sativa (Osa) osa57552 6446.m00164
Oryza sativa (Osa) osa76249 7364.m00146
Plasmodium falciparum (Pfa) pfa2747 PFC0400w
Rattus norvegicus (Rno) rno10376 ENSRNOP00000041625
Rattus norvegicus (Rno) rno11784 ENSRNOP00000044788
Saccharomyces cerevisiae (Sce) sce1447 YDR382W
(S000002790)
Saccharomyces cerevisiae (Sce) sce5590 YOL039W
(S000005399)
Schizosaccharomyces pombe (Spo) spo219 SPAC1071.08 O14317
Schizosaccharomyces pombe (Spo) spo1847 SPBC23G7.15c P17478
Schizosaccharomyces pombe (Spo) spo2991 SPBP8B7.06 P08094
Yarrowia lipolytica (Yli) yli5586 YALI0F05808g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
GO:0005830 cytosolic ribosome (sensu Eukaryota) C
ISS
DmeFBgn0003274
NAS
DmeFBgn0003274
GO:0005840 ribosome C
RCA
AthAt2g27710
At5g40040
At3g44590
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
ISS
PfaPFC0400w
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
NAS
DmeFBgn0003274
TAS
HsaP05387
SceS000005399
S000002790
GO:0003723 RNA binding F
TAS
HsaP05387
GO:0003735 structural constituent of ribosome F
ISS
DmeFBgn0003274
SpoSPBC23G7.15c
SPAC1071.08
SPBP8B7.06
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At3g44590
At2g27710
TAS
HsaP05387
SceS000005399
S000002790
GO:0006412 protein biosynthesis P
ISS
DmeFBgn0003274
NAS
DmeFBgn0003274
TAS
HsaP05387
GO:0006414 translational elongation P
ISS
SceS000002790
S000005399
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
NAS
DmeFBgn0003274
RCA
AthAt5g40040
At2g27710
At3g44590
GO:0009792 embryonic development (sensu Metazoa) P
IMP
CelWBGene00004410
WBGene00016493
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016493
WBGene00004410
GO:0043037 translation P
TAS
SceS000002790
S000005399

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC1071.08
(O14317)
YDR382W
(S000002790)
SPBC23G7.15c
(P17478)
YDR382W
(S000002790)
SPBP8B7.06
(P08094)
YDR382W
(S000002790)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
GO:0005842 cytosolic large ribosomal subunit (sensu
Eukaryota)
C
ISS
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
TAS
SceS000002790
GO:0003735 structural constituent of ribosome F
ISS
SpoSPBC23G7.15c
SPAC1071.08
SPBP8B7.06
TAS
SceS000002790
GO:0006414 translational elongation P
ISS
SceS000002790
SpoSPAC1071.08
SPBC23G7.15c
SPBP8B7.06
GO:0043037 translation P
TAS
SceS000002790

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk