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Search term: YDR353W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRR1
SGD link S000002761
Alternative ID YDR353W
Description Cytoplasmic thioredoxin reductase, key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress
Synonyms YDR353W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0404 A---Y-E

KOGs classification KOGs description
O
CELLULAR PROCESSES AND SIGNALING
Posttranslational modification, protein turnover, chaperones
Thioredoxin reductase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g17420 GI:15227831
Arabidopsis thaliana (Ath) At2g41680_1 GI:7488371
Arabidopsis thaliana (Ath) At4g35460 GI:15237010
Saccharomyces cerevisiae (Sce) YDR353w
(S000002761)
GI:6320560 P29509
Saccharomyces cerevisiae (Sce) YHR106w
(S000001148)
GI:6321898 P38816
Encephalitozoon cuniculi (Ecu) ECU02g0940 GI:19074013 Q8SSF2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
TAS
SceS000002761
GO:0005739 mitochondrion C
IDA
SceS000001148
GO:0005759 mitochondrial matrix C
IDA
AthAt2g17420
GO:0005829 cytosol C
IDA
AthAt2g17420
GO:0004791 thioredoxin-disulfide reductase
activity
F
IDA
AthAt4g35460
At2g17420
SceS000002761
S000001148
ISS
AthAt4g35460
RCA
AthAt2g41680
GO:0006118 electron transport P
RCA
AthAt2g41680
GO:0006979 response to oxidative stress P
IGI
SceS000002761
IMP
SceS000001148
GO:0030503 regulation of cell redox homeostasis P
IC
SceS000001148
IDA
SceS000002761
IMP
SceS000002761
TAS
SceS000002761

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Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000002761

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000002761
(YDR353W)
Homo sapiens (Hsa) 2121 1 ENSP00000335369
(AIFM3)
Q96NN9-1
Saccharomyces cerevisiae (Sce) 2121 0.867 S000001148
(YHR106W)
Homo sapiens (Hsa) 2121 0.052 ENSP00000287295
(AIFM1)
O95831-1
Pan troglodytes (Ptr) 1991 1 ENSPTRP00000024275
Saccharomyces cerevisiae (Sce) 1991 0.867 S000001148
(YHR106W)
Dictyostelium discoideum (Ddi) 363 1 DDB0231235
Saccharomyces cerevisiae (Sce) 363 0.696 S000001148
(YHR106W)
Oryza sativa (Osa) 273 1 Q69PS6 Q69PS6
Oryza sativa (Osa) 273 0.757 Q6ZFU6 Q6ZFU6
Saccharomyces cerevisiae (Sce) 273 0.674 S000001148
(YHR106W)
Schizosaccharomyces pombe (Spo) 477 1 SPBC3F6.03 Q92375
Saccharomyces cerevisiae (Sce) 477 0.497 S000001148
(YHR106W)
Arabidopsis thaliana (Ath) 316 1 NP_195271
(At4g35460.1)
Saccharomyces cerevisiae (Sce) 316 0.665 S000001148
(YHR106W)
Arabidopsis thaliana (Ath) 316 0.595 NP_179334
(At2g17420.1)
Escherichia coli (Eco) 104 1 NP_415408
(EG11032)
P0A9P4
Saccharomyces cerevisiae (Sce) 104 1 S000001148
(YHR106W)


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005624 membrane fraction C
IDA
DdiDDB0231235
GO:0005634 nucleus C
IDA
SpoSPBC3F6.03
TAS
HsaO95831
GO:0005737 cytoplasm C
ISS
SpoSPBC3F6.03
TAS
SceS000002761
GO:0005739 mitochondrion C
IDA
SceS000001148
ISS
SpoSPBC3F6.03
TAS
HsaO95831
GO:0005759 mitochondrial matrix C
IDA
AthAt2g17420
GO:0005829 cytosol C
IDA
AthAt2g17420
SpoSPBC3F6.03
GO:0004791 thioredoxin-disulfide reductase
activity
F
IDA
AthAt4g35460
At2g17420
DdiDDB0231235
SceS000002761
S000001148
ISS
AthAt4g35460
DdiDDB0231235
SpoSPBC3F6.03
GO:0005515 protein binding F
IPI
HsaO95831
GO:0009055 electron carrier activity F
TAS
HsaO95831
GO:0006206 pyrimidine base metabolism P
ISS
SpoSPBC3F6.03
GO:0006309 DNA fragmentation during apoptosis P
TAS
HsaO95831
GO:0006909 phagocytosis P
IMP
DdiDDB0231235
GO:0006950 response to stress P
ISS
SpoSPBC3F6.03
GO:0006979 response to oxidative stress P
IGI
SceS000002761
IMP
SceS000001148
GO:0008630 DNA damage response, signal transduction resulting
in induction of apoptosis
P
TAS
HsaO95831
GO:0019430 removal of superoxide radicals P
ISS
SpoSPBC3F6.03
GO:0030503 regulation of cell redox homeostasis P
IC
SceS000001148
IDA
DdiDDB0231235
SceS000002761
IMP
SceS000002761
ISS
DdiDDB0231235
TAS
SceS000002761
GO:0031000 response to caffeine P
IMP
SpoSPBC3F6.03
GO:0031154 culmination during fruiting body
development
P
IMP
DdiDDB0231235

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5711

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC3F6.03 GI:68013174 Q92375
Saccharomyces cerevisiae (Sce) TRR1
(S000002761)
GI:6320560 P29509
Kluyveromyces lactis (Kla) KLLA0E21692g GI:50309829 Q6HA24
Eremothecium gossypii (Ego) ACL109C GI:45185579
Magnaporthe grisea (Mgr) MG01284.4 GI:39951169
Neurospora crassa (Ncr) GeneID:2711325 GI:32417840
Arabidopsis thaliana (Ath) NTR1 GI:42567414


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC3F6.03
GO:0005737 cytoplasm C
ISS
SpoSPBC3F6.03
TAS
SceS000002761
GO:0005739 mitochondrion C
ISS
SpoSPBC3F6.03
GO:0005829 cytosol C
IDA
SpoSPBC3F6.03
GO:0004791 thioredoxin-disulfide reductase
activity
F
IDA
AthNTR1
SceS000002761
ISS
AthNTR1
SpoSPBC3F6.03
GO:0015197 peptide transporter activity F
ISS
AthNTR1
GO:0006206 pyrimidine base metabolism P
ISS
SpoSPBC3F6.03
GO:0006950 response to stress P
ISS
SpoSPBC3F6.03
GO:0006979 response to oxidative stress P
IGI
SceS000002761
GO:0015833 peptide transport P
TAS
AthNTR1
GO:0019430 removal of superoxide radicals P
ISS
SpoSPBC3F6.03
GO:0030503 regulation of cell redox homeostasis P
IDA
SceS000002761
IMP
SceS000002761
TAS
SceS000002761
GO:0031000 response to caffeine P
IMP
SpoSPBC3F6.03

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1667

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago940 ACL109C
Arabidopsis thaliana (Ath) ath8585 At2g17420.1
Arabidopsis thaliana (Ath) ath11327 At2g41680.1
Arabidopsis thaliana (Ath) ath21702 At4g35460.1
Candida glabrata (Cgl) cgl101 CAGL0A02530g
Candida glabrata (Cgl) cgl2576 CAGL0I01166g
Cryptococcus neoformans (Cne) cne1139 180.m00066
Dictyostelium discoideum (Ddi) ddi12535 DDB0231235
Debaryomyces hansenii (Dha) dha6092 DEHA0G08745g
Escherichia coli (Eco) eco858 16128855
(EG11032)
P0A9P4
Encephalitozoon cuniculi (Ecu) ecu92 19074013
Kluyveromyces lactis (Kla) kla3927 KLLA0E21692g
Neurospora crassa (Ncr) ncr8141 NCU08352.2
Oryza sativa (Osa) osa38973 5079.m00065
Oryza sativa (Osa) osa53194 5955.m00107
Oryza sativa (Osa) osa51857 5987.m00137
Saccharomyces cerevisiae (Sce) sce1411 YDR353W
(S000002761)
Saccharomyces cerevisiae (Sce) sce2872 YHR106W
(S000001148)
Schizosaccharomyces pombe (Spo) spo1274 SPBC3F6.03 Q92375
Yarrowia lipolytica (Yli) yli3850 YALI0D27126g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005624 membrane fraction C
IDA
DdiDDB0231235
GO:0005634 nucleus C
IDA
SpoSPBC3F6.03
GO:0005737 cytoplasm C
ISS
SpoSPBC3F6.03
TAS
SceS000002761
GO:0005739 mitochondrion C
IDA
SceS000001148
ISS
SpoSPBC3F6.03
GO:0005759 mitochondrial matrix C
IDA
AthAt2g17420
GO:0005829 cytosol C
IDA
AthAt2g17420
SpoSPBC3F6.03
GO:0004791 thioredoxin-disulfide reductase
activity
F
IDA
AthAt4g35460
At2g17420
DdiDDB0231235
SceS000002761
S000001148
ISS
AthAt4g35460
DdiDDB0231235
SpoSPBC3F6.03
RCA
AthAt2g41680
GO:0006118 electron transport P
RCA
AthAt2g41680
GO:0006206 pyrimidine base metabolism P
ISS
SpoSPBC3F6.03
GO:0006909 phagocytosis P
IMP
DdiDDB0231235
GO:0006950 response to stress P
ISS
SpoSPBC3F6.03
GO:0006979 response to oxidative stress P
IGI
SceS000002761
IMP
SceS000001148
GO:0019430 removal of superoxide radicals P
ISS
SpoSPBC3F6.03
GO:0030503 regulation of cell redox homeostasis P
IC
SceS000001148
IDA
DdiDDB0231235
SceS000002761
IMP
SceS000002761
ISS
DdiDDB0231235
TAS
SceS000002761
GO:0031000 response to caffeine P
IMP
SpoSPBC3F6.03
GO:0031154 culmination during fruiting body
development
P
IMP
DdiDDB0231235

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC3F6.03
(Q92375)
YDR353W
(S000002761)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC3F6.03
GO:0005737 cytoplasm C
ISS
SpoSPBC3F6.03
TAS
SceS000002761
GO:0005739 mitochondrion C
ISS
SpoSPBC3F6.03
GO:0005829 cytosol C
IDA
SpoSPBC3F6.03
GO:0004791 thioredoxin-disulfide reductase
activity
F
IDA
SceS000002761
ISS
SpoSPBC3F6.03
GO:0006206 pyrimidine base metabolism P
ISS
SpoSPBC3F6.03
GO:0006950 response to stress P
ISS
SpoSPBC3F6.03
GO:0006979 response to oxidative stress P
IGI
SceS000002761
GO:0019430 removal of superoxide radicals P
ISS
SpoSPBC3F6.03
GO:0030503 regulation of cell redox homeostasis P
IDA
SceS000002761
IMP
SceS000002761
TAS
SceS000002761
GO:0031000 response to caffeine P
IMP
SpoSPBC3F6.03

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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