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Search term: YDL020C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPN4
SGD link S000002178
Alternative ID YDL020C
Description Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally regulated by various stress responses
Synonyms YDL020C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


Inparanoid results:

Selected databases only

Inparanoid query cluster Phylogenetic pattern
S000002178

Species Link to cluster Score Model organism
protein page
UniProt link
Saccharomyces cerevisiae (Sce) query - S000002178
(YDL020C)
Gallus gallus (Gga) 1706 1 ENSGALP00000004487
(ZNF532)
Gallus gallus (Gga) 1706 0.587 ENSGALP00000022644
Gallus gallus (Gga) 1706 0.195 ENSGALP00000011430
(LOC425347)
Schizosaccharomyces pombe (Spo) 2578 1 SPBC1105.14 Q9Y815


GO terms for Inparanoid results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1105.14
GO:0005838 proteasome regulatory particle (sensu
Eukaryota)
C
IGI
SceS000002178
IPI
SceS000002178
GO:0003700 transcription factor activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0016563 transcriptional activator activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000086 G2/M transition of mitotic cell
cycle
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000723 telomere maintenance P
IMP
SceS000002178
GO:0045732 positive regulation of protein
catabolism
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0045739 positive regulation of DNA repair P
IMP
SceS000002178
GO:0045941 positive regulation of transcription P
IDA
SceS000002178
IMP
SceS000002178
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
ISS
SpoSPBC1105.14
GO:0046021 regulation of transcription from RNA polymerase II
promoter, mitotic
P
IC
SpoSPBC1105.14
GO:0046685 response to arsenic P
IEP
SceS000002178
IMP
SceS000002178

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48607

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RPN4
(S000002178)
GI:6320184 Q03465
Kluyveromyces lactis (Kla) KLLA0C04103g GI:50304849 Q6CUK9
Eremothecium gossypii (Ego) AER227W GI:45190830


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005838 proteasome regulatory particle (sensu
Eukaryota)
C
IGI
SceS000002178
IPI
SceS000002178
GO:0003700 transcription factor activity F
IDA
SceS000002178
IMP
SceS000002178
GO:0016563 transcriptional activator activity F
IDA
SceS000002178
IMP
SceS000002178
GO:0000086 G2/M transition of mitotic cell
cycle
P
IMP
SceS000002178
GO:0000723 telomere maintenance P
IMP
SceS000002178
GO:0045732 positive regulation of protein
catabolism
P
IMP
SceS000002178
GO:0045739 positive regulation of DNA repair P
IMP
SceS000002178
GO:0045941 positive regulation of transcription P
IDA
SceS000002178
IMP
SceS000002178
GO:0046685 response to arsenic P
IEP
SceS000002178
IMP
SceS000002178

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15224

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2729 AER227W
Candida glabrata (Cgl) cgl3595 CAGL0K01727g
Debaryomyces hansenii (Dha) dha2929 DEHA0D14124g
Kluyveromyces lactis (Kla) kla1379 KLLA0C04103g
Neurospora crassa (Ncr) ncr1594 NCU01640.2
Saccharomyces cerevisiae (Sce) sce787 YDL020C
(S000002178)
Schizosaccharomyces pombe (Spo) spo1768 SPBC1105.14 Q9Y815
Yarrowia lipolytica (Yli) yli6426 YALI0F25861g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1105.14
GO:0005838 proteasome regulatory particle (sensu
Eukaryota)
C
IGI
SceS000002178
IPI
SceS000002178
GO:0003700 transcription factor activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0016563 transcriptional activator activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000086 G2/M transition of mitotic cell
cycle
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000723 telomere maintenance P
IMP
SceS000002178
GO:0045732 positive regulation of protein
catabolism
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0045739 positive regulation of DNA repair P
IMP
SceS000002178
GO:0045941 positive regulation of transcription P
IDA
SceS000002178
IMP
SceS000002178
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
ISS
SpoSPBC1105.14
GO:0046021 regulation of transcription from RNA polymerase II
promoter, mitotic
P
IC
SpoSPBC1105.14
GO:0046685 response to arsenic P
IEP
SceS000002178
IMP
SceS000002178

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC1105.14
(Q9Y815)
YDL020C
(S000002178)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1105.14
GO:0005838 proteasome regulatory particle (sensu
Eukaryota)
C
IGI
SceS000002178
IPI
SceS000002178
GO:0003700 transcription factor activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0016563 transcriptional activator activity F
IDA
SceS000002178
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000086 G2/M transition of mitotic cell
cycle
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0000723 telomere maintenance P
IMP
SceS000002178
GO:0045732 positive regulation of protein
catabolism
P
IMP
SceS000002178
ISS
SpoSPBC1105.14
GO:0045739 positive regulation of DNA repair P
IMP
SceS000002178
GO:0045941 positive regulation of transcription P
IDA
SceS000002178
IMP
SceS000002178
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
ISS
SpoSPBC1105.14
GO:0046021 regulation of transcription from RNA polymerase II
promoter, mitotic
P
IC
SpoSPBC1105.14
GO:0046685 response to arsenic P
IEP
SceS000002178
IMP
SceS000002178

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Query species:

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GO info in one table:

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